Bacillus sp. BH072: OY17_05090
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Entry
OY17_05090 CDS
T03582
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bacb
Bacillus sp. BH072
Pathway
bacb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OY17_05090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacb03019
]
OY17_05090
03009 Ribosome biogenesis [BR:
bacb03009
]
OY17_05090
Enzymes [BR:
bacb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OY17_05090
Messenger RNA biogenesis [BR:
bacb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OY17_05090
Ribosome biogenesis [BR:
bacb03009
]
Prokaryotic type
rRNA helicases
OY17_05090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AJE77516
LinkDB
All DBs
Position
1021302..1022786
Genome browser
AA seq
494 aa
AA seq
DB search
MTITFQDFQLSSDLMKSINRMGFEEATPIQAQTIPLGLLNKDVIGQAQTGTGKTAAFGIP
LVEKMNPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKK
NPHIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSDHQTL
LFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQS
PELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTT
KRKMDRMKEPTLDEALEGQQQVTVDRLRTAISENNLNFYMTAAAELLEDHDAVTVVAAAI
KMATKEPDSTPVRLTDEAPMVSKRYKNQRTSKRRDGQGGGYRGGKGKNNNRSSYDKKRSS
DRRSSGDRRQKKSY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgactataacgtttcaagatttccaattaagttctgatctcatgaaatcaatcaatcgt
atgggatttgaagaagcaacaccgatccaggcacaaacgattccgctcggacttttaaat
aaagatgtcatcggacaagcgcaaacaggtacaggtaaaacagctgcgttcggtataccc
cttgttgaaaaaatgaaccccgagtctcctaatattcaagcaatcgtaatcgcgccaacc
cgtgaattagccattcaagtatctgaagagttatataaaatcggacaagataagcgtgcg
aaagtactgcctatttacggcggccaggatatcggacgtcaaatccgcgcattgaagaaa
aacccgcatatcatcgtaggtacgccggggcgtcttcttgaccatatcaaccgccgcacg
atccgtttaaataacgtgaacacggttgtcatggatgaggctgatgaaatgctgaacatg
ggattcattgatgacattgaatccattctctcaaacgtgccgagcgaccaccaaacgctc
ttattctcagcaacaatgcctgcgccgatcaaacggatcgcagagcgtttcatgactgag
ccggaacacgtaaaagtaaaagcgaaagaaatgactgtgtccaacattcagcagttctac
ttggaagtgcaggagcgcaaaaaattcgatacgctgactcgtcttcttgacattcagtct
ccggaacttgcgatcgtattcggacgtacgaaacgccgtgtcgatgagcttgctgaagcc
ctgaaccttcgcggatatgcggctgaaggaattcacggcgacttaacgcaggcgaaacgt
atggttgcgcttcgcaagtttaaagaaggtgcgatcgaagtgcttgtagcgactgacgtt
gccgcccgcggacttgatatctcaggcgttacccacgtttacaactttgacgtgcctcaa
gatcctgaaagttacgttcaccgtatcggaagaacgggccgtgcaggaaaaacgggtatg
gcgatgacgtttatcacaccgcgtgagaaaagcatgcttcgcgcgattgaacaaacgaca
aaacgcaaaatggaccgcatgaaagagccgacgcttgacgaagcattagaaggacagcag
caggtgacggttgaccgtctgcgcacggcgatcagcgaaaacaacctgaacttctacatg
acggcagctgcggaattgttagaagatcatgatgcagtgacagttgtggctgcagccatt
aaaatggcgacaaaagagccggacagcacgcctgtacgcctcactgatgaagcgcctatg
gtcagcaaacgctataaaaaccagcgtacttctaagcgcagagacggccaaggcggcggc
taccgcggcggcaaagggaaaaacaacaaccgttcttcctacgataaaaaacgctcaagc
gaccgccgttcttcaggtgacagacgccagaaaaaatcatactaa
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