Bacillus sp. BH072: OY17_16460
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Entry
OY17_16460 CDS
T03582
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bacb
Bacillus sp. BH072
Pathway
bacb03030
DNA replication
bacb03430
Mismatch repair
bacb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OY17_16460 (dnaE)
03430 Mismatch repair
OY17_16460 (dnaE)
03440 Homologous recombination
OY17_16460 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacb03032
]
OY17_16460 (dnaE)
03400 DNA repair and recombination proteins [BR:
bacb03400
]
OY17_16460 (dnaE)
Enzymes [BR:
bacb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OY17_16460 (dnaE)
DNA replication proteins [BR:
bacb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OY17_16460 (dnaE)
DNA repair and recombination proteins [BR:
bacb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OY17_16460 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AJE79633
LinkDB
All DBs
Position
complement(3416730..3420068)
Genome browser
AA seq
1112 aa
AA seq
DB search
MSFVHLQVHSGYSLLNSAASVKELVAQAKELGYSSLALTDENVMYGAIEFYKACKSNGIK
PIIGLTASIYTDDTELEAHPLILLAETNTGYQNLVKISSALQSMAKGGMKRKWMKSYHEG
LIAITPGENGYIESLLQAGKFEEAVRAAEGFRELFGDGRFYLGYQPFKGHETLSEEILRL
SAETEIAVCAAGDVRYIKKEDQDAYRCLCAIKAGEKWEDQSGNLPDLYLRTPEEMAEFYT
RHPEAIEAAARIARQCRVDVSLGQTQLPSFPAPDGKSADDYLAEICHEGLRLRFGTPDER
AVRRLEYELDVIRRMKFSDYFLIVWDFMKYAHEKGIVTGPGRGSAAGSLVAYSLFITDVD
PLKHSLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQNKYGAMHVAQIITFGTLAAKA
ALRDTGRVFGISPKEADQLARLIPSKPGMTLEEARRQSAQLNRRLSESAVLHKVFQIARK
IEGLPRHTSTHAAGVVLSKEPLSEVVPLQEGHDGVYLTQYAMDHLEDLGLLKMDFLGLRN
LTLIESIKMMIEKETNTKIDFSEISYQDEKTFSLLSNGDTTGIFQLESSGMRNVLKRLKP
SRLEDIVAVNALYRPGPMENIPLFIDRKHGRARVEVPHEDVRNILSDTYGVIVYQEQIMM
IASRMAGFSLGEADLLRRAVSKKQKDILDRERSHFVEGCLKKEYSVVTANEVYDLIVKFA
NYGFNRSHAVAYSMIGYQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLHEAKGSGIQVL
PPSINKSGFPFAPENGAVRYSLRAVKNVGVSAVKDIYKARTHKPFEDLFDFCFRVPAKSV
NRKTIEALIFSGAMDEFNQNRAALLASVDVALEHAELFRADDDQMGLFLEESFSIKPKYV
EAEEFPLVDKLRFEKEALGVYFSSHPLSAFRDLLKKRGAQAITAARQMPKGQLSIGALLA
GIKTIRTKTGQHMAFLTLSDETGEMEAVVFPDQYRRLSPLLEEGALLFAAGKMEERQEKT
QFIMSSASLLEQTEADRAPSVYIKIEGSRHNQEFLEKMKRILLEHKGETGVYLYYEKDKQ
TIRLPDTFHIQADHQALYRLKELLGRENVVLK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttttgttcacctgcaagtacatagcggctacagcctgttaaacagcgccgcttct
gtaaaagagcttgttgcacaagcgaaggaactcggatattcatcattggcgctgacggac
gaaaatgtgatgtacggcgccattgagttttataaagcatgcaaatcaaacggaattaag
ccgattatcggtctgacggcttctatatacacggacgatacggagcttgaagcacacccg
ctcattcttttagcagagacaaacaccggatatcagaacctggtgaaaatctcaagtgcg
ctgcaatccatggcaaagggcggtatgaagcgaaaatggatgaagagctatcatgagggg
ctgatcgccattacgcccggtgaaaacgggtacattgaaagcctgcttcaagccgggaag
tttgaagaagcggtccgggctgccgaaggtttccgggagctgttcggagacggccgtttt
tatttagggtaccagccgtttaaaggacatgagacgttatcagaagagattctccgcctg
tcagccgaaacggaaatcgctgtctgcgctgcgggggatgtccgttatatcaagaaagaa
gatcaagatgcgtaccgctgtctgtgcgctattaaagccggagagaaatgggaggatcag
agcgggaatctgccggacttatacttgaggacgcctgaagaaatggcagagttttacacg
cggcatccggaagcgattgaagcagccgcgcgtatcgcccggcaatgccgggtcgatgtc
agcctcggacagacacagcttccgtcttttccggcgccggacggcaaatcagccgatgac
tatttggcggagatctgtcatgaggggctgcgcctccgtttcgggactcctgatgagcgc
gctgtccgccggcttgaatatgagctggacgtcatcaggcgcatgaaattcagtgattat
tttctcatcgtatgggactttatgaagtacgcgcatgaaaagggcattgtgacaggcccg
ggaagggggtccgcggcaggctcgcttgtcgcttactcccttttcattaccgacgtggat
ccgcttaaacattctctgctgtttgagaggtttcttaatcccgagcggatcagcatgccg
gatattgatatcgatttccctgatacgagaagggatgaggtcattcagtatgtacaaaat
aagtacggggccatgcacgtcgcccagattatcaccttcgggacattggccgccaaggcg
gcgttaagggatactgggagagtgttcggaatcagcccgaaagaagccgaccagcttgcc
cgcctgattccgtcaaaaccgggaatgacgcttgaggaggcgaggcggcagtccgctcag
ctgaacaggcggctgtccgaatccgccgttcttcataaagtgtttcagatcgcaaggaaa
attgaaggtcttccgcggcacacgtcaacacacgcggcgggggtcgttctcagtaaagag
ccgctttctgaagttgtccctcttcaagaagggcatgacggcgtgtatttaacgcagtat
gcgatggatcacttggaagatctcggtcttttaaaaatggactttttaggtttgcgcaac
ctgacgcttattgaatccattaaaatgatgattgaaaaagagacgaatacgaaaattgat
ttttccgagatttcttatcaggatgaaaaaacgttctcgctattgtcaaacggtgatacg
acgggtattttccagctggaatcatcaggaatgagaaacgtgctgaaacgcctgaagccg
tcaagactggaagacattgtcgcggttaacgcgctttacaggccgggaccgatggaaaat
attccgttatttatcgaccggaagcacgggcgggcgcgtgtggaagtgccgcacgaggac
gtaagaaatattctcagtgacacttacggcgtcatcgtctatcaagaacagataatgatg
atcgcttcgcgcatggcagggttttcattaggtgaagcggatctgctcagacgggctgtc
agcaaaaagcaaaaggacattctggacagagagcgaagccattttgttgaagggtgctta
aaaaaggagtattctgtagtcactgcaaacgaggtctacgatctgattgtaaaattcgct
aactacggattcaacagaagccatgctgtcgcatacagcatgatcggctatcagctcgcc
tatttaaaagcccattatccgttatattttatgtgcgggctgttgacgagcgtcatcggc
aatgaggacaaaatatcgcaatatctgcatgaagcgaaggggagcgggattcaagtcctt
ccgccgtcaataaacaaaagcggttttccgtttgcgccggaaaacggagccgtcagatac
agtttgcgggccgttaaaaacgtaggcgtctcggcagtgaaagatatttataaagcaaga
acacataaaccgttcgaggatcttttcgatttctgctttcgcgtacctgcaaaaagcgtg
aatcggaaaaccatcgaagcccttatattttctggcgccatggacgaattcaatcaaaat
cgcgcagccttgctggcctccgttgatgtggctttagagcacgctgaactttttcgtgca
gacgatgaccaaatgggattgtttttggaagaatcgttctccattaagccaaaatatgta
gaggctgaggaatttccgctcgtggacaagcttcggttcgaaaaagaagctctcggtgtt
tatttctcaagccatcctttgtctgctttcagggatctcctgaaaaaacggggggcgcaa
gcgatcacagcagcgcggcagatgccgaaggggcagctgtcaatcggcgctttgctcgcg
ggcatcaaaacgattcggacaaagacaggtcagcatatggcgtttctcacattaagcgat
gaaacgggagaaatggaagccgtcgtgtttcctgaccaatatagaaggctgtctccgctg
ttagaagaaggcgcgcttttattcgccgccgggaaaatggaagagcgtcaggagaagaca
caattcatcatgtcatccgcctctcttcttgagcagacggaggcagacagagcgccgtct
gtttacatcaaaatcgaaggcagccggcacaatcaggagtttttggaaaagatgaagcgt
attttactggagcataaaggggaaaccggcgtttatctttattatgaaaaagacaagcag
acgatcaggctgccggatacttttcatattcaggcggaccatcaggcgttataccgttta
aaagagctgctgggccgcgaaaacgtcgtgttaaaatag
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