Bacteroidales bacterium CF: BRDCF_p1007
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Entry
BRDCF_p1007 CDS
T02861
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bacc
Bacteroidales bacterium CF
Pathway
bacc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRDCF_p1007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacc03019
]
BRDCF_p1007
03400 DNA repair and recombination proteins [BR:
bacc03400
]
BRDCF_p1007
Enzymes [BR:
bacc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRDCF_p1007
Messenger RNA biogenesis [BR:
bacc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRDCF_p1007
DNA repair and recombination proteins [BR:
bacc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BRDCF_p1007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGY53634
UniProt:
U5Q8L1
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All DBs
Position
1201597..1203498
Genome browser
AA seq
633 aa
AA seq
DB search
MENALDVLKKYWGYDRFRPKQEEIIQSVVTGLDTLALLPTGGGKSLCFQIPAMMCDGICL
VVTPLIALMKDQVENLQKRGIKAICVHSGMTRNEVDYTLDNAIFGDYKFLYLSPERLQSE
MVKVRISRMSINFLVVDEAHCISQWGYDFRPDYLLIKDIRELTGDVPVVALTATATPDVA
GDIMKQLGFKKENLIKSSFERKNLSYVVRETEDKSGQLLKIALSVHGSGIVYVRERKRAE
ETAAFLNAQGINADSYHAGYEASQRAKKQDAWMKGETRVIVATNAFGMGIDKPDVRFVCH
FDLTESAEAYFQEAGRAGRDGKRSYAVLLWNRRDIKRIKQIMEVTFPSFDYLKEVYQRLF
NYIGYDYGTGKGDVIKFNLSDFAQKERLHMVNAYHAIKYIEGEGYWELTEELENPSRIMF
TVSRDELYKIQLKNSNLDSFVKILMRLYTSLFSAFVPIDEEYIARVSRNNKANITANLIM
LSRMHVIDYIPAVRSPLLILRVERLENRGLLFSEENYEKRKGSYQKRVESMIEYVSTTNV
CRSVMLLGYFGQSGAADCGTCDVCLANKRNEDIRQSDKVIEDKLSEMLSEAPLSLDEISM
GMGEGSNLCIEILRDMIDRGIIKEIYGKYTLVR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgcactggatgtattaaaaaaatactggggatatgaccgattcagacctaag
caggaagagattattcaatctgttgtaaccggtttggacactctcgccctacttcccact
ggtgggggtaaatctctctgttttcagataccagccatgatgtgcgatggaatatgtctg
gttgtaacgcctttgattgctcttatgaaggatcaggtggaaaatcttcagaaacgagga
atcaaggcaatctgcgtgcattcaggtatgaccaggaatgaggttgactataccctggac
aatgcaatattcggagattataaatttctctatctctcgcctgaaaggttacaaagtgaa
atggtcaaggtccggatttccagaatgagcataaactttctggttgtcgatgaggctcat
tgcatctcccaatggggctatgattttcgccctgattacctcctgatcaaggatataaga
gagctgacaggagatgttccggtagtagccctgacagctactgcaactcctgatgttgca
ggtgatattatgaaacagctgggtttcaaaaaggagaacctcattaaatcaagttttgag
aggaagaatctctcctatgttgtaagagagacggaagataaaagcggacagttgttgaaa
atagcactttctgttcatggttccggaattgtttatgtacgtgaaaggaagagagcagag
gagactgctgcatttttaaatgctcaggggataaatgccgattcttaccatgccggatat
gaggcttctcagagggcgaaaaaacaggatgcctggatgaagggggagacaagagttatt
gttgccaccaatgcctttggtatgggaattgacaaacccgatgtcaggtttgtctgccac
tttgatcttacagaatcagcagaggcatatttccaggaagcgggaagagccggaagggac
gggaagcgttcatatgcagttcttctatggaaccgacgagatattaagaggataaaacag
ataatggaggttacatttccttcttttgactatctgaaggaggtatatcagaggttgttc
aactatatcggctatgattacggcacaggtaaaggagatgtaataaagttcaacctgagt
gactttgctcagaaggagcgattgcacatggtcaatgcctaccatgcaattaagtatatt
gaaggagaggggtattgggagctgactgaggagttggaaaacccatcaagaataatgttc
actgtttcaagggacgaactttataaaattcagcttaaaaacagtaatcttgattcattt
gttaagatactgatgaggctttacacatctctcttttctgcttttgtccctatagatgag
gagtatatagcccgggtttcaagaaacaataaggcaaacattactgcaaatctgattatg
ctttcaaggatgcatgtaatagattacattccggctgtgagatctccgttgcttatttta
agagtagagagacttgaaaacaggggacttctattttctgaggagaactatgaaaaaaga
aagggaagttatcagaaaagagttgagagcatgatagagtatgtctcaacgacaaatgtc
tgcagatctgttatgcttcttggttatttcgggcaaagcggagcggctgattgtggaaca
tgcgatgtatgccttgcgaataaaagaaatgaggacataagacaatctgataaagtgatt
gaggataaactcagtgaaatgctttcagaagcacctctctcccttgatgaaatatctatg
ggtatgggagaggggagcaacctctgtattgagatactgagggacatgatagacagggga
attatcaaagagatttacggaaaatatacattagtccgataa
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