Bacteroidales bacterium CF: BRDCF_p1523
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Entry
BRDCF_p1523 CDS
T02861
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bacc
Bacteroidales bacterium CF
Pathway
bacc03410
Base excision repair
bacc03430
Mismatch repair
bacc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRDCF_p1523 (recJ)
03430 Mismatch repair
BRDCF_p1523 (recJ)
03440 Homologous recombination
BRDCF_p1523 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacc03400
]
BRDCF_p1523 (recJ)
DNA repair and recombination proteins [BR:
bacc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BRDCF_p1523 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BRDCF_p1523 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BRDCF_p1523 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
AGY54150
UniProt:
U5Q9T3
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All DBs
Position
complement(1790833..1792569)
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AA seq
578 aa
AA seq
DB search
MALEKKWIVKEPGNPALVRQLSADLGIDQTLANLLVQRNIKSQAEARAFLRPQLDQLHDP
FLMKDMDKAVERLISAISRQEKILIYGDYDVDGTTAVSLVYSFLRKHSNNNLDYYIPNRY
AEGYGISYKGIDWAYENGFTLIIALDCGIKAVEKVKYAKEKGIDFIICDHHLPDGHLPEA
VAVLDPKRSDCSYPFDDLSGCGVGFKLMQAYSKKMDIPQADVLSLLDLLVVSIASDLVSI
TGENRVLAYFGLKQLNTSPRRGLLSIIKLAGLEKHMITIDDIVFKIGPRINAAGRMESGK
TAVDLLTSRNDDDARNIGDAINTHNNDRKNEDRKITLEASEMVANINHFNDRKATVVYNP
DWHKGVLGIVASRLVESFYRPTIVLCKSNGLITGSARSIPGFDLYEAIEKCSEYLENFGG
HMYAAGLTLKEENFNPFCEKFESIVASTITKEVLTPVVNIDTYLDFKQITPRFFNLLKQF
QPFGPGNLSPVFISEKVYDNGNGRKVGSESGHLKLELIQEDDFHRHISAIAFNRSEHFEH
LRSGNPVDICYSIAENYYRGIANIQLRVKDIKLVEEEI
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggctttagaaaagaaatggatagtgaaagaaccgggcaatccggctctggttagacag
ttgtctgccgatttaggaatcgatcagacacttgccaatcttttagtgcaaagaaatatc
aaatcgcaggcagaagcgagggcatttctcagacctcagcttgatcagcttcatgatcct
tttttgatgaaagatatggataaagccgtagagaggctgatttcggctattagcagacaa
gagaagatacttatttacggagattatgatgtagacggaactacagctgtatcgcttgtc
tactcttttttgagaaagcactcaaacaataatcttgattattacatacccaacagatat
gcagagggttatgggatttcatacaaaggaatcgactgggcctacgagaacggatttacg
ctgataattgcacttgactgcggaattaaagccgttgagaaggtcaaatatgcaaaggag
aaggggatagatttcatcatctgtgaccaccacctcccggacggccatctgccggaagca
gtggcggtactggatcccaaaagatctgactgcagttacccatttgacgacctttcaggt
tgtggagtgggattcaaattgatgcaggcatactcaaaaaaaatggatattcctcaggca
gatgtactttcattactggatcttctggttgtcagcattgcatcagacctagtgtcaatc
acaggggagaacagagtcctggcatacttcgggttgaaacagctcaacacctctcccagg
agagggcttttatcgataatcaagcttgccgggcttgaaaagcacatgattacaatagat
gatattgtattcaagataggaccaaggataaatgcagcaggaaggatggagtccggcaag
actgcagttgaccttctgacctcaaggaacgatgacgatgcaagaaatatcggtgatgcc
atcaatactcacaataacgacagaaagaacgaggacaggaagataacacttgaggcaagt
gagatggttgcaaatatcaaccatttcaatgacaggaaggccaccgtggtctataatcct
gactggcacaagggtgttctgggcatagtggcctcaaggcttgtggagagtttttacagg
ccaaccatcgttctctgtaaatccaacggactgataacaggttctgcaaggagtatcccg
ggatttgacctctatgaggcaatagagaagtgttccgaatatctggaaaacttcggcggg
catatgtatgctgcaggacttaccctcaaggaggagaattttaaccctttctgcgagaag
tttgaatcaatagttgcatcaaccataacaaaagaggtactcacaccggttgtcaacatc
gacacatatcttgacttcaaacagataacacccagattcttcaatctgttgaagcaattt
cagcctttcggtcccgggaacttatctcctgtattcatttcagagaaggtatatgacaac
ggtaacggaagaaaagtagggtcggagagtggtcacctcaaacttgagctcatacaggag
gatgacttccacagacatatctcggcaatagccttcaaccgttcagagcatttcgagcat
ctccgctccggtaatcctgtagatatctgctactcaatcgcagagaactattacagagga
attgcaaatatccagcttcgcgttaaggatataaaactcgtggaagaggaaatttag
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