Bacteroidales bacterium CF: BRDCF_p2206
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Entry
BRDCF_p2206 CDS
T02861
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bacc
Bacteroidales bacterium CF
Pathway
bacc03030
DNA replication
bacc03430
Mismatch repair
bacc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRDCF_p2206 (dnaE)
03430 Mismatch repair
BRDCF_p2206 (dnaE)
03440 Homologous recombination
BRDCF_p2206 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacc03032
]
BRDCF_p2206 (dnaE)
03400 DNA repair and recombination proteins [BR:
bacc03400
]
BRDCF_p2206 (dnaE)
Enzymes [BR:
bacc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRDCF_p2206 (dnaE)
DNA replication proteins [BR:
bacc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BRDCF_p2206 (dnaE)
DNA repair and recombination proteins [BR:
bacc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BRDCF_p2206 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AGY54833
LinkDB
All DBs
Position
complement(2531314..2534901)
Genome browser
AA seq
1195 aa
AA seq
DB search
MPFVHLHVHTQYSVLDGAANIKNLFKKASEDKQVALAITDHGNMFGVKEFLDTAKKYPDV
KPIVGCEFYLTREGRFNKRGREDQGAYHLILLAKNHNGYKNLIKLASYAYIEGFYYKPKI
DRELLEKYSSDLICSSACLGGEVPQAIIEWNLREAEETILWYKNLFGEDYYLELQRHETN
LPGANATVFITQQFVNEEIVKLAKKHNIKCIATNDVHFVNKEDGDAHDRLICLTTNSDVD
DPKRMRYTKQEYLKTQEEMETIFSDIPQVLENTLEIVEKVEKYSIESDPILPVFPIPEQY
DNSDDYLRDLTYKGAVSRYGDLTPEITERIDFELGTIKRMGYPDYFLIVQDFISAARNMG
VSVGPGRGSAAGSVVAYCLTITDVDPIKYKLLFERFLNPDRISLPDIDIDFDDDGRSKVY
RYVEDKYGKDHVSHVITFGTMGAKTAIRDIARIQKLPLNESDRLAKLVPMRFSDDNNGDK
VEVSLDNCIKHVPEIAEAFKSEDPLVRDTMEFAKKLEGNVRNVGVHACAVIIGRDDLREF
IPISTAKDKESGEDIWVSQYEGSHIEKVGMLKMDFLGLKTLSIIKDSIENIKRSRGFVLD
INSIPLDDKTTYDLFSRGDSVATFQFESDGMRKWLRELKPTKLEDLIAMNALYRPGPMDY
IPDFVDRKQGRKQIEYDLPEMEEILAETYGVTVYQEQVMLLSQALAGFTKGEADKLRKAM
GKKDKKLMDELKTKFISGGTERGHSEEILEKIWKDWTAFASYAFNKSHSTCYAWIGYQTA
YLKANYPAEYMAATLSRNLNNIEEITKLMDECKRMGLKVLGPDVNESANNFTVNKKGDIR
FGMAGIKGVGSAAVDSIVKAREEGDAPFSSVFDFIERINIGVVNRKTIESLVFAGAMDCF
EEVKRAQYMLPTLKEDTFLDALLKYANKFQYDVLNGGNSLFGESETIKLTPPEIPPLTVE
VNKYDLLNREKELVGMYLSAHPLDQFAFEVDHFTTNTLSQIKELLDRAPKESAIQGKEVI
IAGIITNVKISYTKVGSKPYANFTVEDYGGTFSFTLFSKDYENYMQYMQPNLPLLIKCAI
LPRFSFGANKQEAPKEYELKIKGMRHLANTKEDFIKQVTLDLPVSSLTSDVRKNLVKRLK
ENPGTAVLTINVLDYTNKLSVEFISTKFKVSLDQDMLNYLNSVSIGCSFTPTLSF
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgttcaccttcacgttcacactcaatactctgttcttgacggagcagctaac
ataaagaacctttttaaaaaagcatccgaagataaacaggttgcacttgcgattaccgat
cacgggaatatgttcggagtcaaggagtttctggatacagccaaaaagtatcctgatgta
aagccgattgtcggttgtgagttctatctgacaagagaggggcgcttcaataaaagagga
agggaggaccagggtgcttatcaccttattttgctggcaaagaaccacaacggatataaa
aacctgatcaagcttgcctcatacgcatatattgagggtttctactataaacctaaaatc
gacagggagcttcttgagaaatactcttcagacctgatttgttcctctgcatgcctgggc
ggagaggttccgcaggcaattatagagtggaatctcagagaggcagaggagacaattctt
tggtacaagaatctttttggcgaagactactatcttgaattacaaaggcatgagacaaac
ttgccgggagcaaacgctactgttttcataacacaacagtttgtcaacgaggagattgtt
aaactggccaaaaagcataacataaaatgtattgcaacaaatgatgtccattttgtcaac
aaggaggacggagatgcacatgaccgtcttatctgccttacgacaaattctgacgtagat
gatccgaaaaggatgaggtataccaagcaggagtaccttaaaacccaggaggagatggag
accattttcagtgacatacctcaagtgcttgagaacactctcgagatagttgaaaaggta
gaaaaatattcaatagaatctgatcccatcctgcctgtctttccgatacctgaacaatac
gacaactccgatgactatctgcgcgatcttacctataaaggagctgtaagccgttatggc
gatctaactccggagataaccgagaggattgatttcgagcttgggacaatcaagcgaatg
ggttatcccgactactttcttattgtacaggatttcatatccgcagcaaggaatatgggt
gtctctgtcggaccgggaagaggatctgccgccgggtcggttgttgcatactgtctaacc
attactgacgttgaccccatcaagtataagcttctgtttgagcgtttcctgaatccggac
cgaatctcgcttcctgatattgacattgactttgatgatgacggcaggtcaaaggtgtac
agatatgtagaggataaatatgggaaagaccatgtatcccatgttattacattcggcacc
atgggtgccaagactgcaatcagagacattgccaggattcagaagctgccgctgaatgag
tccgacaggcttgccaagctggttcctatgaggttcagtgatgataataacggtgataag
gttgaggtttcacttgacaactgtattaagcacgtgccggagatagcagaggcattcaaa
tctgaagatcctcttgtgagagatacgatggagtttgccaagaaacttgagggtaacgtt
cgaaatgtaggagttcatgcctgtgcagtaattatcgggcgtgatgacctcagggagttt
atacctatttcaacggcaaaggataaggaaagtggcgaggacatatgggtatctcaatat
gaaggatctcatatagagaaagtcggtatgctgaagatggatttcctgggcctgaaaact
ttgtctatcattaaagactcaatcgagaatataaagagatccagaggatttgtccttgac
atcaactctataccgcttgacgacaagactacctacgatcttttcagccgaggtgactca
gtagcgacattccagtttgaaagtgacggtatgagaaagtggctgagggagctgaagccg
acaaagcttgaagacctcatagccatgaacgccttgtacagaccgggtcctatggattat
atcccggattttgtcgaccgtaaacagggcagaaagcagattgaatacgatcttccggag
atggaagagattctcgctgagacatatggggttactgtttatcaggagcaggtcatgctt
ctttcacaggcacttgcgggctttacaaagggtgaggccgacaagcttagaaaggcgatg
ggaaagaaggacaagaaactcatggatgagcttaagactaagtttatttcaggaggaact
gagagaggacactctgaggaaattcttgagaaaatctggaaagactggacagcatttgcc
tcttatgcattcaacaagtctcactctacttgctatgcctggataggttatcagacagca
tatcttaaggcaaattacccggcagagtatatggctgccacgctgagcaggaacctgaac
aacattgaggagattaccaaactgatggatgagtgcaagagaatgggtcttaaagtgctg
ggtcctgatgttaatgaaagtgcaaacaacttcacggtcaacaaaaaaggcgatatacgt
tttggtatggccggcataaaaggtgtcggttcagcagcggttgacagtattgtgaaagcg
agggaggagggagatgcaccattctcgtctgtatttgatttcatagagaggatcaacatt
ggggtagtaaacagaaagacgatcgagtctcttgtttttgccggagcaatggattgtttc
gaggaggtaaaaagagcacaatatatgttgccaactctcaaggaagatacatttctcgat
gcgcttctcaagtatgccaacaagtttcagtacgatgtcctgaatggtgggaattccctt
ttcggagagagcgagacaatcaaactgacccctcccgagataccgcctctgaccgtcgag
gttaacaaatatgacctgctcaaccgcgagaaggagctggtcggtatgtacctatctgct
caccctttggatcagtttgcttttgaagttgaccatttcaccacaaacaccctttcacag
atcaaggagttgcttgacagggcaccgaaagagagtgctatacagggcaaggaggttata
attgcaggaatcataacaaatgtgaagatctcatacacaaaggtgggttctaagccttat
gccaactttacggtagaggattacggcggaactttcagttttaccctcttctctaaagat
tatgagaactatatgcagtatatgcagcctaatcttccactgttaatcaagtgtgctatt
ttaccgaggttctcttttggtgccaataaacaggaggcgcctaaggagtatgagttgaag
atcaagggtatgagacatcttgccaataccaaggaggactttataaagcaggtgacactg
gatctccctgtttcatctcttacatcagatgtcaggaaaaaccttgttaaaaggttaaag
gagaatccggggacggctgtcttgacaatcaatgtgcttgactatacaaacaaattgagc
gtggagtttatctctacaaagtttaaggtttctctggatcaggatatgcttaactatctg
aactcagtttcaatcggctgctctttcactccaaccctgagcttttag
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