Bacteroidales bacterium CF: BRDCF_p338
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Entry
BRDCF_p338 CDS
T02861
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bacc
Bacteroidales bacterium CF
Pathway
bacc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRDCF_p338 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacc03019
]
BRDCF_p338 (pnp)
03016 Transfer RNA biogenesis [BR:
bacc03016
]
BRDCF_p338 (pnp)
Enzymes [BR:
bacc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BRDCF_p338 (pnp)
Messenger RNA biogenesis [BR:
bacc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BRDCF_p338 (pnp)
Transfer RNA biogenesis [BR:
bacc03016
]
Prokaryotic type
tRNA degradation factors
BRDCF_p338 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
RNase_II_C_S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
AGY52965
LinkDB
All DBs
Position
402095..404278
Genome browser
AA seq
727 aa
AA seq
DB search
MNVVKKTIQLRDGRVIEIETGKLAKQADGSVVVKLGKTMLLATVVAAKDAKEDVDFMPLS
VEYKEKYASAGRYPGGFLKREGRANDSEILVSRLIDRALRPLFPDDFHAEVFVNVNLISA
EKEIMPDALAGLAASAALAVSDIPFNGPISEVRVARIGGNLVINPSFTELKDADIDIMVA
ATLDNIMMVEGEMKEVSEKDMLEAIKFAHEEIKIQCQAQIELMEEVGKTVKRAYCHETQD
EELREAVQKFCYDKCYAIAKSGSGKHERTDAFDALKAEFVATLSEEDAAAKKIMIDRYYH
AVEKEAMRNMILDEGIRLDGRNTKQIRPIWCEVDYLPATHGSAIFTRGETQSLTTVTLGT
KLDMKAIDEVLVEGTEQFVLHYNFPPFSTGEAKPYRGTGRREIGHGNLALRALKFVVPKG
EENPYAVRVVSDILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLITKNGKFAVL
SDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEILEQALEQARQGRMHIMGEMM
KCISEPREDYKPHVPRIIQIVIPQEFIGAVIGTGGKVIQEIQRTTGTTITITEENETGVV
DIFGEDKESMDKALTWIKNITTVPEAGEVYKGKVVSILEFGAFVQILPGKEGLLHISELD
WKKVDKVEDEVKVGDEVEVKLLEIDSKTGKMRLSRKALLPKPEGYVEPERKPRKEGERKP
FKGPKKY
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagtaaaaaagaccatccagttaagagatggcagagtaatcgaaattgaaaca
ggaaaacttgcaaagcaggcagatggttctgtagttgtcaaacttggcaagacaatgttg
ctggcaacagttgtggcagcaaaagatgccaaggaggatgtggattttatgcctctttca
gttgaatataaagagaaatatgcttcagcgggccgttatcccgggggatttcttaaacgt
gaaggccgtgcaaatgactccgaaattttagtatcccgtttaattgaccgtgctctcagg
ccacttttcccggatgattttcatgcagaggtatttgtaaacgttaatctgatttctgca
gagaaggagattatgccggatgcccttgcaggccttgcagcttcagcagcactggcagta
agtgatattccgttcaacgggcctatctctgaagtcagagttgccaggataggtggcaat
cttgtaatcaacccgtcatttacagagttgaaggatgcagatatagatattatggtagct
gccactctcgacaacatcatgatggttgagggagagatgaaggaggttagtgagaaggat
atgcttgaggccataaaatttgcgcatgaagagataaagatacaatgccaggcacagata
gagcttatggaagaggtaggcaagacagtgaagagagcctactgccatgagacgcaagat
gaagagctgcgagaagcggttcagaagttctgctacgacaagtgctatgcaatagcaaaa
tcgggttcaggaaaacacgagagaacagatgcatttgatgctctcaaggcagagtttgta
gcaacactatcagaagaggatgctgctgccaagaagattatgattgacagatattaccat
gcagttgaaaaagaggcaatgcgtaatatgatccttgatgagggaattcgtctcgacggc
aggaatacaaaacagatcagaccaatctggtgcgaggttgattatcttccggcaacacac
ggatctgcaatcttcaccaggggtgagacacagtctctcacaacagtaactttgggaacc
aagcttgacatgaaggcgattgacgaggtacttgttgaggggacagagcagtttgtactc
cattacaacttccctcctttctctacaggtgaggctaagccgtacaggggaacaggccgc
agggagataggtcacggaaatcttgctctcagggctctgaagtttgtagtccctaagggt
gaggagaatccttatgcagtacgcgttgtttcagatattcttgagtcaaacggatcatct
tcaatggctacagtttgtgccggcacattagctttgatggatgcaggtgtcaagataaag
aaaccggtttccggaattgcgatgggtcttatcacaaagaacggtaagttcgcagtactg
tcagacattcttggtgacgaggatcacctcggagatatggacttcaaggttaccggaaca
aaagacggtattaccgctacacagatggatataaaggtagacggtctgtcatacgagata
ctggagcaggctctggagcaggctcgtcagggtcgtatgcatattatgggtgagatgatg
aagtgtataagcgaaccacgtgaggattacaagccacatgtgccaagaataatacagatt
gtcattcctcaggagttcatcggtgcagttatcggtacaggcggcaaggttattcaggag
atacagcgcacaacaggaactaccatcaccattacagaggagaatgagacaggtgttgtt
gatatattcggagaggacaaggagagcatggataaggcacttacatggatcaagaatata
accacagttcctgaagcaggagaagtatataaaggtaaggttgtctcaatccttgaattc
ggtgcttttgtgcagattcttccgggcaaggaggggctgcttcatatttctgaactcgac
tggaaaaaggtagacaaggtagaggatgaggtaaaagtcggagacgaggtagaggttaaa
cttcttgagatagattcaaaaaccggtaaaatgaggctttcacgtaaagctctgcttcca
aaaccggaaggttatgttgaaccggaaagaaaaccaagaaaagagggcgaaaggaagcct
tttaaaggtccgaagaaatactaa
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