Bacteroidales bacterium CF: BRDCF_p474
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Entry
BRDCF_p474 CDS
T02861
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bacc
Bacteroidales bacterium CF
Pathway
bacc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRDCF_p474 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacc03019
]
BRDCF_p474 (recQ)
03400 DNA repair and recombination proteins [BR:
bacc03400
]
BRDCF_p474 (recQ)
Enzymes [BR:
bacc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRDCF_p474 (recQ)
Messenger RNA biogenesis [BR:
bacc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRDCF_p474 (recQ)
DNA repair and recombination proteins [BR:
bacc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BRDCF_p474 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
HTH_40
ResIII
HHH
ACT_ACR9_C
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AGY53101
UniProt:
U5Q3L5
LinkDB
All DBs
Position
576734..578932
Genome browser
AA seq
732 aa
AA seq
DB search
MQITSEFLHEQLKTFFGFNSFKGPQEEIIVHLINGGDAFVLMPTGGGKSLCYQLPALVMD
GTAIIISPLIALMKNQVDAIRGFVEEREGIAHFLNSSLTKAQLQEVRDDLLAGNTKLLYV
APESLTKEENIQLLKQIKISFYAVDEAHCISEWGHDFRPEYRRINPIVQEIGVAPVIALT
ATATPKVQHDIQKNLDMVGARIFKSSFNRPNLYYEIRPKVNIDKEIIKFIKSNKGKSGII
YCLSRKKVEDVAELLVVNGINALPYHAGLDANTRTTNQDKFLMEEADVIVATIAFGMGID
KPDVRFVIHYDIPKSLEGYYQETGRSGRDGGEGQCVAFYSYKDIQKLEKFMQGKLISEQE
IGKHLLMETVSYAESNLCRRKVLLNYFGEDYTQENCGSCDNCLYPKKQFEGKEDVLLVLD
LISGMKEQFKAEHIANILAGVNNSIIKSYNHHHHELFGIGSSKGIRFWMAVIRQALIHHL
IDKDIERYGLLSCTEQGIKFLENPTSIMLTEDREFMDTDEGDDIVTPGSKSGGGGGDAAL
LSMLKDLRSSMSKRLNLPPFVIFNDPSLEDMSIQYPVTLDELKNCQGVGEGKAKKFGKDF
IDLISKYVAENEIDRPLDLVVKSVVNKSVNKVFIITSIDRKLSLEDIADAKNMEMNDLLD
EIESIVNSGTKLNIDYYIRQTVDDDKVDDIYEYFKTEASTDSLKEAVDELGRNYTEEEIR
LVRIKFISEIGN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattacttctgaatttttgcatgaacagttaaagacattcttcggttttaactca
ttcaagggtccacaagaagagataatcgtgcatcttattaacggaggagatgcatttgtc
cttatgcctacaggcggaggcaagtctctgtgctatcaactgccggctcttgtgatggat
ggtaccgccataataatttcccctttgatagcattgatgaagaatcaggttgatgccatc
agaggttttgttgaggagagagaggggattgctcattttctgaattcttcattgacaaag
gctcaattgcaggaggtcagggatgatctgcttgccggaaatacaaaattgctatatgta
gcccccgagtcacttacaaaggaggagaatatacaattgctcaaacagataaagatttca
ttctatgctgttgatgaggcccattgtatatcggagtggggacacgatttcaggcctgaa
tacagaaggataaacccgattgtccaggagataggggtggctcccgtaattgcacttact
gcaacggcaacacccaaggtgcagcatgacattcagaagaatctggatatggtgggtgcc
aggatttttaaatcttcattcaacaggccaaacctctattatgaaattcgcccaaaggtt
aatattgacaaggagataataaaattcataaagtccaacaagggaaagtcaggaatcata
tattgtctaagcaggaaaaaagttgaggatgttgcagagctgcttgtggtgaatggcata
aacgcattgccatatcatgcaggtcttgatgccaacacgcgaaccacaaatcaggataag
ttccttatggaggaggctgatgttatagtggccacaattgcttttggtatgggtattgac
aagcctgatgtgagattcgtaattcactatgatattccgaagagccttgaaggttactat
caggagacaggtcgctcgggaagagacggcggtgagggccagtgtgttgctttctattcg
tacaaggatatccagaaacttgagaagttcatgcagggaaaactgatttccgaacaggag
attggtaaacaccttcttatggaaactgtttcgtatgcagagtctaatctctgccgcaga
aaggtgcttctgaactatttcggggaggattatactcaggagaattgcggctcatgtgat
aattgcctctaccctaaaaagcagtttgagggcaaagaggatgtccttcttgttctcgac
cttatctcagggatgaaggagcaattcaaggctgagcacattgccaacatacttgcgggt
gtgaacaattcaataataaagtcttataaccaccaccatcatgaactattcggcataggg
agttcgaaaggtattcgtttctggatggctgtaatcagacaggcacttattcaccatctg
attgacaaggatattgagaggtacggcctactgtcatgtacagaacagggtataaagttc
cttgaaaatcctacatcaatcatgcttacagaagacagagagttcatggatactgacgag
ggagacgatattgttacacccggcagcaagtcaggtggcggaggaggggatgcagctctt
ctctcgatgcttaaagatcttcgctcttcaatgtcaaaaaggttgaacctgcccccattt
gtcattttcaatgatccttcgctggaagatatgtcaattcaatatccggtaacactggat
gaacttaaaaattgtcagggtgtaggagagggaaaggcaaaaaagttcgggaaggatttt
atagatctcatctcaaagtatgttgccgagaacgagatagacagacctttggatctggtt
gtcaagagtgtggtgaacaaatctgttaacaaagtatttataatcacaagcatagacagg
aagctgtcccttgaggatattgccgatgccaagaatatggagatgaacgatttgttggat
gagattgaatcaattgtcaactcaggaacaaaactcaatattgactattacatcaggcaa
actgtggatgatgacaaggtggacgacatttacgagtacttcaagacagaagcatccacc
gattccctgaaggaggcggtggatgagcttggccgtaactatacagaggaagagatccgt
cttgttaggataaagtttatctctgaaataggaaattaa
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