Bacteroidales bacterium CF: BRDCF_p495
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Entry
BRDCF_p495 CDS
T02861
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bacc
Bacteroidales bacterium CF
Brite
KEGG Orthology (KO) [BR:
bacc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bacc03016
]
BRDCF_p495 (truB)
Enzymes [BR:
bacc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BRDCF_p495 (truB)
Transfer RNA biogenesis [BR:
bacc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BRDCF_p495 (truB)
Prokaryotic type
BRDCF_p495 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AGY53122
UniProt:
U5Q3I2
LinkDB
All DBs
Position
complement(600581..601336)
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AA seq
251 aa
AA seq
DB search
MHYHILDKESLGERLSGNLEEYPHGIVIPLDKPYGWTSADAVRKIKFMAQRYFRLKNIKV
GHAGTLDPLATGILLICLGKATKVAEKLQAGEKGYIAEITLGSTTPSFDLEKEIDAHYPY
EHIDLPMIEEKLKVFLGEQDQVPPIFSAKLIDGKRAYEIARAGGNEEMKASRINIMELEV
ISYKAPVLMLRVRCSKGTYIRSLARDLGSALESGAHLSGLTRISSGDFSIKNSVKIEEIE
MILKQNLELSV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcattatcacatcttagacaaagagagccttggagagagactgtcaggcaatcttgaa
gagtacccgcatggtatagtaattcctcttgacaagccctatggctggacatctgctgat
gctgtcaggaagatcaaattcatggctcaaaggtatttcaggttaaaaaacataaaggtc
gggcatgcaggaacactggatcctcttgcgaccggcatacttcttatatgcctcggaaaa
gcaaccaaagtagcagaaaagctccaggcaggagagaaagggtatatagccgaaataaca
ttgggcagcaccacaccctctttcgaccttgaaaaggagatagatgcacattatccgtat
gaacatatagacctccctatgatagaggagaagttaaaggtgtttctgggggagcaggat
caggttcctccgattttttcagcaaaacttattgacggcaagagagcatacgagatagcc
agggccggcggtaatgaggagatgaaggcttcaaggattaacatcatggagcttgaagta
atatcatataaagcaccggtattaatgctacgcgtaaggtgcagtaaaggaacatacata
cgctcattggccagggatctcggatctgccctggagagcggcgcccatctaagcggattg
accagaatctcctcgggagatttttctataaaaaacagtgtgaaaattgaagaaattgaa
atgatattgaaacaaaatctggaattatccgtataa
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