Bacteroides sp. CACC 737: H1A11_17335
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Entry
H1A11_17335 CDS
T10488
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bace Bacteroides sp. CACC 737
Pathway
bace03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bace00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H1A11_17335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bace03021
]
H1A11_17335
03400 DNA repair and recombination proteins [BR:
bace03400
]
H1A11_17335
Enzymes [BR:
bace01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H1A11_17335
Transcription machinery [BR:
bace03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H1A11_17335
DNA repair and recombination proteins [BR:
bace03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H1A11_17335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
SAM_EPH
NPL
Motif
Other DBs
NCBI-ProteinID:
QMI80170
UniProt:
A0A7D6XML0
LinkDB
All DBs
Position
4182517..4183509
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AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVLMLEADSRFGKFEFRPLEPGFGITVGNALRRILLSSLEGFAITTIKID
GVEHEFSSVPGAKEDVTNIILNLKQVRFKQVVEEFESEKVSITVENSSEFKAGDIGKYLT
GFEVLNPELVICHLDSKSTMQIDITINKGRGYVPADENREYCTDVNVIPIDSIYTPIRNV
KYQVENFRVEQKTDYEKLVLEITTDGSIHPKEALKEAAKILIYHFMLFSDEKITLETNDA
DGNEEFDEEVLHMRQLLKTKLVDMDLSVRALNCLKAADVETLGDLVQFNKTDLLKFRNFG
KKSLTELDDLLESLNLSFGTDISKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacctgataaagtattaatgttggaagcggactctaga
ttcggaaaattcgaatttcgtccgttggagcccggtttcggtattaccgtgggtaatgca
ctgcgccgcatcctgctttcttcattggaaggttttgctatcactactatcaagatagac
ggtgttgagcatgaattttccagtgttccgggggcaaaagaggatgttactaacattatc
ttgaatctgaaacaagtgagattcaagcaagtagttgaagaattcgagagtgagaaagta
agtattacggtcgagaattcaagtgaatttaaagcaggtgacataggtaagtatttgact
ggatttgaagtgttaaatcctgaattagttatttgtcatttagattcaaagtcaactatg
cagatagatattacgatcaacaaaggtcgtggttatgttcctgctgacgaaaaccgcgaa
tattgcaccgatgtgaacgtaattcctatcgattctatttatactccgatacgtaatgtg
aagtatcaggtagagaacttccgtgtagagcagaagaccgactacgagaaactggtactt
gagattactaccgacggttccattcatccgaaagaagccctgaaagaagcagcaaagatt
ctgatttatcacttcatgcttttctctgacgagaagattacgctggaaacaaatgatgct
gacggcaatgaagagtttgatgaagaagtattgcacatgcgtcagttgctgaagaccaag
ctcgttgatatggatctctctgtacgtgccctcaactgtctgaaggctgcagatgtagag
actcttggtgacttggtacaattcaacaagacggatttgctgaaattcagaaacttcgga
aagaaatcgcttaccgagcttgatgatttgctggaaagtctgaatctgtcgtttggaact
gatatttctaaatataaattagataaagaataa
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