Bacillus sp. FJAT-18017: AM500_00100
Help
Entry
AM500_00100 CDS
T10545
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bacf Bacillus sp. FJAT-18017
Pathway
bacf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bacf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AM500_00100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacf03021
]
AM500_00100
03400 DNA repair and recombination proteins [BR:
bacf03400
]
AM500_00100
Enzymes [BR:
bacf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AM500_00100
Transcription machinery [BR:
bacf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AM500_00100
DNA repair and recombination proteins [BR:
bacf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AM500_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALC88378
LinkDB
All DBs
Position
complement(17492..18436)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQVDG
VLHEFSTIEGVVEDVTSIILNIKKIALKIYSDEEKTLEIDVQGEGTVKAGNITHDSDVEI
LNPDLHIATLGSNGHLRMRLTARRGRGYTPADQNKREDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQMTNYDKLTLDVWTDGSTGPQEAIAFGAKILTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatagaaaaaccaaaaatcgaaacggttgagatcagcgatgatgccaagtac
gggaagttcgtcgtagaaccacttgagcgtggatatggtacaactctgggtaactcctta
cgtcgtatcctactatcttcactcccaggtgcagcagtcacatcgatccaagtcgatggg
gtactacatgagttttcaacaattgaaggcgtcgttgaggatgttacatccattatctta
aacattaagaaaatcgcattaaaaatatactccgatgaagaaaagacgcttgaaatcgat
gtacagggagaaggtacggtgaaagccggaaacattactcatgatagtgatgtggaaatc
ctgaatcctgacttgcatattgcaacattgggatcaaacggacatcttcgtatgcgcttg
actgctaggcgcggaagaggctatacaccagccgatcaaaacaagagggaagaccagccg
attggagttattccgattgactcgatctatactcctgtatcccgtgtatcctatcaagta
gagaatactcgtgttggacaaatgaccaactatgataaacttactttggatgtatggaca
gacggcagcactgggcctcaagaagctattgcttttggagccaaaatcctgactgagcat
ttgaatatctttgtgggtcttaccgatgaagcgcaaaatgccgaaatcatgattgaaaaa
gaagaagaccaaaaagaaaaagtccttgagatgacaattgaagaattggacctttctgtc
cgttcatacaactgcctaaagcgtgcgggaattaacactgtccaggagcttgcaaacaag
accgaggaagatatgatgaaagtgcgcaaccttggccgaaagtcactcgaggaagtaaag
gcaaaactagaagagcttggattgggtctgcgcaaggacgactag
DBGET
integrated database retrieval system
