Bacillus sp. FJAT-18017: AM500_00265
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Entry
AM500_00265 CDS
T10545
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bacf Bacillus sp. FJAT-18017
Pathway
bacf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bacf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AM500_00265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacf03021
]
AM500_00265
03400 DNA repair and recombination proteins [BR:
bacf03400
]
AM500_00265
Enzymes [BR:
bacf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AM500_00265
Transcription machinery [BR:
bacf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AM500_00265
DNA repair and recombination proteins [BR:
bacf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AM500_00265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ALC88411
LinkDB
All DBs
Position
complement(37208..40804)
Genome browser
AA seq
1198 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTETGETSLEKKQLLSEKEYRAYREKYGNKFQASMGAEAIKKLLS
DIDLNKEADTLKEELKTAQGQRRTRAIKRLEVIEAFRGSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGTMGEGMIFKDTNEALIAYQNGYVHLHTRVAVH
AGSLNNETFTDEQNSQLLLTTVGKLIFNEILPKSFPYINEPTKDNLEVKTPEKYFVERGT
DIPARIKEMPLVEPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFKYSTKAGITVGV
ADIVVLGEKEEILSESQKKVDNVQKQFRRGLITEDERYDRVISIWSQAKDTIQGKLMNSL
NKTNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVRDDDCGTDRGLHVRALKDGTEVIEALD
ERLIGRYARRNIKHPETGDIIVPENGLITEDLAVQIVNVGIEEVQIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVIAELEGVVVGINEGRDRQHEIVVQGEVESKTYSAPYTARLKVAVNDRVLR
GQELTEGSIDPKELLKVTDVGSVQEYLLREVQKVYRMQGVEIGDKHIEVMVRQMLRKVRV
IDAGETDVLPGMLLDIHQFTDANGKALLNGKMPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLIPAGTGMQRYRKAEPVLKGEQTDQVPVE
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgatgttaataattttgagtatatgaaaatcggtcttgcatcacctgataaaatt
cgttcatggtcttttggtgaagtcaagaagcctgaaacaattaactatcgtacattgaag
ccggaaaaagacggtttgttctgtgagagaattttcggacctacaaaggactgggaatgc
cattgcggaaaatacaagcgtgtccgctacaaaggtgttgtctgtgatcgatgcggcgtt
gaagtaacacgcgccaaagtgcgccgtgaacgaatgggccacattgagctagcagctcct
gtttctcatatctggtatttcaaaggaattcctagccgaatggggcttgtcctggacatg
tcacctcgtgctctggaggaagttatttactttgcatcttatgttgttactgaaacaggc
gaaacaagccttgaaaagaagcaactcctttcagagaaggaataccgtgcttatcgtgaa
aagtatggaaacaagttccaggcctctatgggtgccgaagcaataaagaaattactttcg
gatatcgacctcaataaagaagccgatacgctgaaggaagaattaaaaaccgcgcaggga
caaaggcgtacacgggcaattaaacgtcttgaagtaatcgaagcttttcgtggatcggga
aatgaaccgtcttggatgattcttgatgtacttccggttatcccgccggaacttcgcccg
atggttcagttggatggcggacgctttgcgacttctgacctgaatgacctgtaccgtcgc
gttattaacagaaacaaccgcttgaagcgccttctagatctgggtgctcctagcattatc
gtccaaaatgaaaagcgtatgcttcaggaagcagtagatgcgctaatcgataacggccgc
cgcggccgtcctgtaacagggcctggaaaccgcccattgaaatctctttcgcacatgctg
aaaggaaaacagggacgtttccgccaaaaccttcttggtaaacgtgttgactattcaggg
cgttcggtaatcgttgtaggtccgaacctgaaaatgtatcagtgcggactgcctaaggaa
atggcacttgagttattcaagccattcgtcatgaaggaattggttgagaagggtcttgcc
cataatataaaatctgccaagcgcaaaatagaacgcgttcagccggaagtttgggatgta
cttgaagacgtaatcagggagcacccagtccttttaaaccgtgcccctacactgcacagg
cttggtattcaggcgttcgaaccaactttggtagagggccgtgccattcgtcttcatccg
ctcgtatgtacagcatataacgctgactttgacggagaccagatggctgtacacgtaccg
ctttccgcagaagctcaggcagaagcacgcttactgatgctggcagctcagaacatattg
aatccgaaagacggaaaacctgttgtaactccttctcaggatatggtactgggtaactac
tacttgactcttgaacgtgaaggtacaatgggtgaaggtatgattttcaaagatacaaat
gaagccctgattgcatatcaaaatggttatgttcatctgcatactagggtagcagtccat
gcgggatcgttgaataatgaaactttcaccgatgaacaaaacagccagctgttattgacg
actgtcggcaaactcatattcaatgaaattttgccaaaatctttcccatatatcaatgaa
ccaacgaaagataatcttgaagtaaaaaccccagaaaagtattttgttgaaagaggtact
gatataccggcgcgaattaaggaaatgccgcttgtcgaaccttttaagaaaaaaatactt
ggcaacatcattgcagaagtgtttaaacgcttcaagattactgaaacgtccaaaatgctt
gaccgcatgaaggatcttggattcaaatattcaacaaaagccggcatcactgtcggtgtt
gctgacatcgttgtattgggtgaaaaagaagagatacttagtgaatctcagaaaaaggtt
gataatgttcagaaacagttcagacgcggtttgatcaccgaagatgagcgctatgatcgt
gtcatttcaatctggagccaagcgaaggatactattcagggtaaacttatgaactccctg
aataaaacaaacccaattttcatgatgagtgactccggtgcccggggtaacgcatccaac
tttacacagcttgcaggtatgcggggtctgatggccaacccggctggacgaatcatcgag
ttgccaattaagtcgtccttccgtgaaggtctgacagtattggaatactttatatctact
catggtgcccgtaaaggtcttgctgatacagcccttaaaacagctgactctggttacctt
acccgccgtcttgttgatgttgcccaggatgtcatcgtccgtgacgatgactgcggaacg
gaccgaggattgcacgtccgtgcacttaaagacggtacggaagtaattgaagcacttgat
gaacgcctaatcggccgttatgcaagaaggaatattaaacaccctgaaacaggtgatatt
attgttccagaaaatggcttgattactgaagacttggctgtgcagatcgttaatgtaggc
attgaggaagttcaaatccgttcagcatttacatgtaacacccgacatggagtatgtaag
aagtgctacggacgaaacttggcaactggacaggaagtcgaggtcggagaagcggttggt
attatcgcggctcagtctatcggggaaccgggtacacagcttacaatgcgtacattccat
acgggcggcgttgctggtgacgatattacccaaggtttgccacgtatccaggaattgttt
gaagctcgtaatccaaaaggccaggctgttattgctgaactcgagggtgtcgttgttggt
attaacgagggaagggaccgccagcatgaaattgtggtacagggagaagttgagtcaaaa
acttactcagccccatatactgcaaggctaaaggttgcagttaatgatcgtgtactaaga
ggccaggaactaacagaaggttctattgatccaaaagaactcctgaaagtaaccgatgtc
ggttcagtccaagaatatctgcttcgtgaggtacaaaaggtatataggatgcaaggtgtt
gaaattggtgacaagcatattgaagtaatggtccgtcaaatgctgcgtaaggtgcgtgtc
attgatgccggagagacagatgtcctcccgggtatgctgctagatattcaccagtttacc
gatgcaaacggtaaggcgctgttaaatggaaaaatgcctgccacaggtcgcccggtactt
ctgggtattacaaaggcgtctcttgaaacagattcattcctttctgcagcatccttccag
gaaacaacaagagtccttacagatgcagccatcaaaggtaaacgcgatgaactgcttggc
ttgaaagagaatgtcattatcgggaaattgattcctgcgggaacaggtatgcagcgttat
cgtaaggcagagccggttcttaaaggtgaacaaactgatcaagtacctgtagaataa
DBGET
integrated database retrieval system
