Bacillus sp. FJAT-18017: AM500_07080
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Entry
AM500_07080 CDS
T10545
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bacf Bacillus sp. FJAT-18017
Pathway
bacf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM500_07080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacf03019
]
AM500_07080
03009 Ribosome biogenesis [BR:
bacf03009
]
AM500_07080
Enzymes [BR:
bacf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AM500_07080
Messenger RNA biogenesis [BR:
bacf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AM500_07080
Ribosome biogenesis [BR:
bacf03009
]
Prokaryotic type
rRNA helicases
AM500_07080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALC89571
LinkDB
All DBs
Position
1570100..1571437
Genome browser
AA seq
445 aa
AA seq
DB search
MSEFINLGISKKVTNIMASNGIAVPTPIQEKVIPLALEGKDIIAQAQTGTGKTFAFLLPI
LERLELDAAHIQALIVTPTRELAIQITAELERIVKELHDVKVLAAYGGQDVDKQLKKLDK
GVHIVVGTPGRLLDHIRRGTIRLDELSTLVLDEADQMLHIGFLNEVEAIIQETPPTRQTM
LFSATMPSEVRRLAQKHLRDPQFIQVEKTQGPADTVSQLAVQTTDRGKQGALMDLVNTHR
PFMAVVFCRTKRRVGRLYEVLKSNKFSCDELHGDLSQAKREQVMKRFRNAEFQLLIATDV
AARGLDVEGVTHVFNYDIPEDAEIYVHRIGRTGRAGTKGLAITLYTAADSQLLRSIEKEL
NIRIKKQELELSKKDDSSKGDDRPRGQADKKRSDRPEKPKRGGKPTAAGRSSSHEQHRSN
RGRNNEKPHGRGRAANKASAKGKRR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatttataaatctgggtatatctaaaaaagttacaaatataatggcttcaaat
gggatagccgttccgactccaatccaggagaaagtcatcccccttgcacttgaaggaaag
gatatcattgcccaggcgcaaacgggaacaggtaagaccttcgcttttctattgccaatc
ctcgaaaggcttgagctcgatgcagcccatattcaagccctcattgtaacgccgactcgt
gagcttgccatccaaatcaccgctgagcttgagagaattgttaaagaactccatgatgtt
aaggtgttagcagcttatggcggtcaagatgtagacaagcaactaaaaaaactggataag
ggtgtccatattgttgtcggaacacctggaaggctgcttgaccatatcaggaggggaacg
atcaggttagatgaactttccaccctcgtccttgatgaagccgatcagatgctccatatc
ggatttttgaatgaagttgaagcaatcattcaggaaactccaccaactaggcaaactatg
cttttctctgctactatgccatcagaagtgcggaggctggcacaaaagcatttacgggat
ccgcagtttattcaggttgaaaaaacgcagggacccgccgacacggttagccagctggca
gttcaaacaacggaccgcggcaagcaaggggcgcttatggacctagttaatacgcaccgt
cccttcatggcagttgtgttttgccgtactaaacggcgggtgggcaggctttatgaagtt
ctaaagtctaataaattttcctgcgatgaattgcacggggacctatcccaagcaaaacgt
gagcaggtaatgaagagattccgaaatgctgaatttcagctattgattgcaacagatgtt
gctgcacgcgggctagatgttgaaggtgtaacccatgtattcaattatgatatacctgaa
gatgcagaaatctatgtccaccggattggacggacaggccgtgcggggactaaggggctt
gcaattactttatatactgctgccgattcgcagcttcttcgttccattgagaaggaatta
aatatacggatcaaaaaacaggaactcgaattgagtaaaaaggatgactcttcaaaaggg
gacgacagacctagaggacaagcagataaaaagagatctgaccgtccggaaaagcctaag
agaggcgggaaacccaccgcagctgggagatcttcatcccatgagcagcaccgctccaac
cgcgggaggaataatgaaaagccgcatggccgcggtagagcagccaataaggcttccgca
aaaggaaagagaagataa
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