KEGG   Bacillus sp. FJAT-18017: AM500_15095
Entry
AM500_15095       CDS       T10545                                 
Name
(GenBank) Zn-dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bacf  Bacillus sp. FJAT-18017
Pathway
bacf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bacf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AM500_15095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bacf03019]
    AM500_15095
Messenger RNA biogenesis [BR:bacf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AM500_15095
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: ALC90961
LinkDB
Position
complement(3221641..3223308)
AA seq 555 aa
MRKKKNKSIKIIALGGVGEIGKNMFLCEVDRDIFVLDAGLMFPEDEMLGIDIVIPDISYL
IDNKDRVKAIFLTHGHEDHIGALSYILKQINVPVYGTELTLALANAKLKEQEYRGKTEFI
EIDSDSVVDMGSVTVSFFNTNHSIPGSVGICVNTTEGAVVYTGDFKFDQGATRMYKPEIG
KMAEIGERGVLCLLSDSTEAEKPGYTTSESKVAREMCDTFYSAPGRLIAACFASDINRIQ
HIFDAATRTGRKVAVVGKSLERIYHIAVDLGYLEIADDLIIQLSEISDYPDNKIVILMTG
SQGEPLEGLQKMARKSHKLINIKEGDTVIIAATTLKGSELFLAKTVDMLLRAGANVVSNK
KLIHVSSHGSQEELKFMINLMKPKLFIPVHGEYRMLKAHEKVARECGLSRESIYLPDIGE
IVEVKEGQFVPGGKVPSGNVLIDGIGVGDVGNIVLRDRRLLSQDGTLIVVVTLSRKERKI
LAGPEIISRGFVYVRESEKLMEESAKLVREIVEKKISKDFFDWTSLKQDMRDDLNKYLYE
KTKRRPMILPIIMEA
NT seq 1668 nt   +upstreamnt  +downstreamnt
ttgcgaaagaaaaagaataaatcaatcaagataatcgctctaggcggtgtcggagaaatc
gggaagaatatgttcctgtgtgaagtggacagggatatttttgtgctcgatgcgggcctc
atgttccctgaagatgaaatgcttggcattgatatcgtcatcccggatatatcctacttg
attgataataaagacagggtaaaggctattttcctgacacatggccatgaggaccatatc
ggggcactatcctatatccttaagcaaatcaatgttcctgtttacgggaccgagctgaca
ttggcacttgcaaatgcgaagctaaaggaacaggaatacaggggaaaaactgaattcatc
gaaattgattcggactctgtagtcgatatgggaagtgtgacggtatctttttttaatacg
aaccatagtatacccggctcggttggaatttgtgtcaacacgacggaaggagctgtcgta
tacacgggtgattttaagtttgatcagggtgcaaccaggatgtacaagcctgaaatcggc
aagatggctgaaattggtgaacggggagtactgtgtcttctttccgacagtaccgaagct
gagaaaccaggttacacaacttcggaatctaaagttgcaagggaaatgtgcgatacattc
tatagtgcaccagggcgtcttattgcagcttgttttgcttctgatattaaccggatccag
catattttcgatgctgcaactagaaccggcaggaaggtcgccgttgtaggaaaaagcttg
gaacgtatttatcacatcgcagttgaccttggttatctggagatagcggatgatttgatt
atccaactatcggaaatttccgactatccggataacaaaattgtcatcctaatgacaggc
tcacaaggagagccacttgaaggtctgcagaaaatggctcgcaagtctcataagcttatc
aatatcaaagaaggcgatacagttatcatcgcggcgactacacttaagggaagcgaactt
ttcctagccaagacagttgatatgcttcttcgggccggagcaaatgttgtatccaataag
aagctgatccacgtatcgagccacggcagccaggaagagttgaagtttatgattaatctc
atgaagccaaaacttttcattcctgtgcacggtgagtaccgtatgctgaaagcccatgag
aaggttgcccgggagtgcgggctctcacgagagagtatttatcttcctgatattggtgaa
atcgttgaggtaaaagaaggccaattcgtaccaggcggtaaagtaccatcaggcaatgtg
ctgattgatggaataggtgttggcgatgttggcaatattgttcttcgcgaccgcaggctt
ctttcccaggatggaacattgattgttgttgttacgctttcaaggaaagaaagaaaaatc
ctggcggggcctgaaattatctcgagagggttcgtgtatgtgcgggaatccgaaaagcta
atggaggaatcagccaaacttgttagggaaattgttgagaagaaaatttccaaagacttc
tttgactggacaagtctaaagcaggatatgagggacgacctaaacaagtacctttatgaa
aaaacaaaacgccgaccgatgattttgccaatcatcatggaggcttaa

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