Bacillus sp. FJAT-18017: AM500_15095
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Entry
AM500_15095 CDS
T10545
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bacf Bacillus sp. FJAT-18017
Pathway
bacf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM500_15095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacf03019
]
AM500_15095
Messenger RNA biogenesis [BR:
bacf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AM500_15095
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ALC90961
LinkDB
All DBs
Position
complement(3221641..3223308)
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AA seq
555 aa
AA seq
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MRKKKNKSIKIIALGGVGEIGKNMFLCEVDRDIFVLDAGLMFPEDEMLGIDIVIPDISYL
IDNKDRVKAIFLTHGHEDHIGALSYILKQINVPVYGTELTLALANAKLKEQEYRGKTEFI
EIDSDSVVDMGSVTVSFFNTNHSIPGSVGICVNTTEGAVVYTGDFKFDQGATRMYKPEIG
KMAEIGERGVLCLLSDSTEAEKPGYTTSESKVAREMCDTFYSAPGRLIAACFASDINRIQ
HIFDAATRTGRKVAVVGKSLERIYHIAVDLGYLEIADDLIIQLSEISDYPDNKIVILMTG
SQGEPLEGLQKMARKSHKLINIKEGDTVIIAATTLKGSELFLAKTVDMLLRAGANVVSNK
KLIHVSSHGSQEELKFMINLMKPKLFIPVHGEYRMLKAHEKVARECGLSRESIYLPDIGE
IVEVKEGQFVPGGKVPSGNVLIDGIGVGDVGNIVLRDRRLLSQDGTLIVVVTLSRKERKI
LAGPEIISRGFVYVRESEKLMEESAKLVREIVEKKISKDFFDWTSLKQDMRDDLNKYLYE
KTKRRPMILPIIMEA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaaagaaaaagaataaatcaatcaagataatcgctctaggcggtgtcggagaaatc
gggaagaatatgttcctgtgtgaagtggacagggatatttttgtgctcgatgcgggcctc
atgttccctgaagatgaaatgcttggcattgatatcgtcatcccggatatatcctacttg
attgataataaagacagggtaaaggctattttcctgacacatggccatgaggaccatatc
ggggcactatcctatatccttaagcaaatcaatgttcctgtttacgggaccgagctgaca
ttggcacttgcaaatgcgaagctaaaggaacaggaatacaggggaaaaactgaattcatc
gaaattgattcggactctgtagtcgatatgggaagtgtgacggtatctttttttaatacg
aaccatagtatacccggctcggttggaatttgtgtcaacacgacggaaggagctgtcgta
tacacgggtgattttaagtttgatcagggtgcaaccaggatgtacaagcctgaaatcggc
aagatggctgaaattggtgaacggggagtactgtgtcttctttccgacagtaccgaagct
gagaaaccaggttacacaacttcggaatctaaagttgcaagggaaatgtgcgatacattc
tatagtgcaccagggcgtcttattgcagcttgttttgcttctgatattaaccggatccag
catattttcgatgctgcaactagaaccggcaggaaggtcgccgttgtaggaaaaagcttg
gaacgtatttatcacatcgcagttgaccttggttatctggagatagcggatgatttgatt
atccaactatcggaaatttccgactatccggataacaaaattgtcatcctaatgacaggc
tcacaaggagagccacttgaaggtctgcagaaaatggctcgcaagtctcataagcttatc
aatatcaaagaaggcgatacagttatcatcgcggcgactacacttaagggaagcgaactt
ttcctagccaagacagttgatatgcttcttcgggccggagcaaatgttgtatccaataag
aagctgatccacgtatcgagccacggcagccaggaagagttgaagtttatgattaatctc
atgaagccaaaacttttcattcctgtgcacggtgagtaccgtatgctgaaagcccatgag
aaggttgcccgggagtgcgggctctcacgagagagtatttatcttcctgatattggtgaa
atcgttgaggtaaaagaaggccaattcgtaccaggcggtaaagtaccatcaggcaatgtg
ctgattgatggaataggtgttggcgatgttggcaatattgttcttcgcgaccgcaggctt
ctttcccaggatggaacattgattgttgttgttacgctttcaaggaaagaaagaaaaatc
ctggcggggcctgaaattatctcgagagggttcgtgtatgtgcgggaatccgaaaagcta
atggaggaatcagccaaacttgttagggaaattgttgagaagaaaatttccaaagacttc
tttgactggacaagtctaaagcaggatatgagggacgacctaaacaagtacctttatgaa
aaaacaaaacgccgaccgatgattttgccaatcatcatggaggcttaa
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