Biomaibacter acetigenes: D2962_03895
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Entry
D2962_03895 CDS
T09817
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bacg
Biomaibacter acetigenes
Pathway
bacg03420
Nucleotide excision repair
bacg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bacg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D2962_03895 (pcrA)
03430 Mismatch repair
D2962_03895 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacg03400
]
D2962_03895 (pcrA)
Enzymes [BR:
bacg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D2962_03895 (pcrA)
DNA repair and recombination proteins [BR:
bacg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D2962_03895 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D2962_03895 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
Terminase_6N
DEAD
Motif
Other DBs
NCBI-ProteinID:
AYO29860
UniProt:
A0A3G2R339
LinkDB
All DBs
Position
795454..797658
Genome browser
AA seq
734 aa
AA seq
DB search
MNFLEDLNPEQKKAVTHPGGPLLVLAGAGSGKTRVLTYRVAYLIEKAGVRPENILAITFT
NKAAREMKDRIEKLFPGVHGLLVSTFHSACVRFLRSDIDRLGYNRNFIIFDTQDQQVLMR
ECLKARNIDEKKYTPSGVLNYIGRAKDRLLTPEKCMDRAKDIRERTMAELYELYQRRLRE
NNAMDFDDLIMNTVELFRQNPEVLSYYRRRFSHILVDEYQDTNRAQYELVRLMAQEHRNL
CVVGDDDQSIYGFRGADIRNILDFEEDFPDATVIRLEQNYRSTGNILDAANHVIDHNFGR
KKKTLWTKNETGEKIRCASLEDEHEEAFFIAREIEYLIREKRLDYGDFAVLYRTNAQSRV
LEEIMLKMGIPYKMVGGIRFYQRKEVKDLLAYLRVSANPSDNVSLIRIINVPRRGIGDAT
VNNLRAISDENGISIYEIIKRIGEFPISTSSRGKLLKFGSLLEDLMKLAKTMAVSDFMNY
VLEKTGYMAELEAENTPDAISRMENLKEMVGAALEFEKRAPGGNLEDFLAEAALLSDVDD
LSEAEQAVILMTLHSAKGLEFPVVFLAGMDEGIFPHSRSMLDEDELEEERRLCYVGITRA
KKILYLTRAWRRNIYGNTSYYSASRFINEIPPELLEEIAPGGQGAEFKAAAARDHLDSQF
MFGTRTPTAPASGGSSYSGSSGGLKPGDRVKHSKWGEGTVVDLDGMDEDAEISINFPSVG
LKHLILKYAPIIKI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttagaagatttaaatccggaacagaagaaggcagtaacacatccggggggt
ccgctcctcgtcctggctggagccggcagcggcaagacccgggtgctcacatacagggtg
gcttaccttattgaaaaggcaggagtcagaccggaaaacatactggccataacctttacc
aacaaggctgcccgggaaatgaaggacaggatcgaaaagctgtttccgggagtccatggg
cttctggtgagcacctttcattctgcatgtgtacgttttctaagatctgatatagacagg
ctcggctacaacaggaatttcatcatcttcgatacccaggaccagcaggtactgatgcgg
gagtgcttgaaagcccgcaatatagatgaaaagaaatatactccctcgggggtgctgaat
tacatcggcagggccaaggatagacttctcaccccggaaaaatgcatggaccgggcaaag
gacatccgggaaaggaccatggcggaattatatgagctttaccagaggaggctcagggaa
aacaatgccatggactttgatgacctcataatgaatacggtagagctctttcggcaaaat
cctgaagtgctctcatattatcgcaggaggttttcccatatcctggtggatgaatatcag
gataccaaccgggcccagtatgagcttgtaagattgatggcccaggagcacaggaactta
tgtgtagtgggcgatgatgaccagagtatatacggctttcggggagccgacataagaaac
atcctggactttgaagaggatttccccgatgccacggtgatacgcctggaacagaactat
cgttctacgggaaacatcctggatgcggcaaatcatgttattgaccacaatttcgggcgc
aaaaaaaagaccctgtggaccaaaaatgaaaccggtgaaaaaattcgctgcgcttcactg
gaagatgagcatgaagaggctttttttattgcccgggaaattgaataccttatcagagaa
aagcgactggattacggggactttgcagtgctttacaggaccaatgcccagtccagggta
ttggaggaaatcatgctgaagatgggtattccatataaaatggtgggaggcataaggttc
taccagaggaaggaagtaaaggacctgctggcatatctgagggtgtcggccaatccttcg
gacaatgtgagcctcataaggataataaatgtgccccgcaggggaataggagatgctacc
gtaaacaacctgagagccatatccgatgaaaatggaataagcatttatgagataataaaa
aggataggggaatttcccatttccacatcttccaggggtaaattattaaaattcggcagc
ctcctggaagacctgatgaaattggcaaaaacaatggccgtttccgactttatgaactat
gtactggaaaagacgggatatatggcagaacttgaggccgagaacacccccgacgctata
agccgcatggagaacctgaaggaaatggtgggggctgcactggaatttgaaaaaagggct
cccggtggaaacctggaggattttctggcggaagccgcgctgctttccgatgtggatgac
ctttcggaagcggagcaggcggtgattctcatgacattgcacagcgccaagggattggag
tttccggtggtgttcctggcgggcatggatgaaggtatttttccccactccaggtctatg
ctggatgaagatgagctggaggaagagcggcgcctctgttatgtaggcataacccgggcc
aaaaaaatcctgtatctcacccgggcctggcggaggaatatttacggcaatacgtcgtat
tattcagcttcaagatttattaatgaaattccaccggaattactggaggaaatagcaccg
ggcgggcaaggggctgaatttaaagccgcggcggccagagaccaccttgattctcaattt
atgtttggcaccaggacgccaactgcgcccgcatctggaggttcgagctattccggttct
tctggaggcctcaagcccggggatagagtaaaacactccaaatggggcgagggtaccgtg
gtggacctcgatggaatggacgaagatgctgagatttccataaactttccatcggtggga
ttaaaacacctgatactaaaatacgcgccgataataaaaatataa
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