Biomaibacter acetigenes: D2962_07315
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Entry
D2962_07315 CDS
T09817
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bacg
Biomaibacter acetigenes
Brite
KEGG Orthology (KO) [BR:
bacg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacg03032
]
D2962_07315 (topA)
03400 DNA repair and recombination proteins [BR:
bacg03400
]
D2962_07315 (topA)
Enzymes [BR:
bacg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D2962_07315 (topA)
DNA replication proteins [BR:
bacg03032
]
Prokaryotic type
DNA Topoisomerases
D2962_07315 (topA)
DNA repair and recombination proteins [BR:
bacg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D2962_07315 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_Ribbon_TF
Toprim_4
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AYO30457
UniProt:
A0A3G2R6I7
LinkDB
All DBs
Position
1487441..1489522
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AA seq
693 aa
AA seq
DB search
MAKSLIIVESPAKAKTIGKFLGRNFKIQASMGHVRDLPKSQLGINIEKGFAPKYITIRGK
GSLLESLKKEASKVEKILLATDPDREGEAISWHLANLLGLPEDEPCRVEFHEITKNAVSE
SIKHPRKINKNLVEAQQARRILDRLVGYKISPILWRKVKWGLSAGRVQSVAVRIICDREK
EIREFVTREYWTIDASLSDEKTGSRIKAQLHSKSDKKFEINNKQEADLILSELKNETFIV
SEVKKSERKRNPSPPFTTSSMQQEAARKLKFTAKKTMMVAQQLYEGLDIKGEGTVGLVTY
IRTDSTRISDQAVNEARDYINKNFGKEYISERPPVQKNKKNIQDAHEAIRPTSVFRTPES
VKDSLTRDQYRLYKLIWERFVSSQMAPAVYDTVSVDIKAGQYIFKATGSVLKFQGFMAVY
IESTDEEAEKEEGSLPPLEAGQLLKLIKLLPEQHFTQPPPRYTEAMLVKTLEEKGIGRPS
TYAPIIDIIQKRGYVEKEKGRFKPTELGEIVVQIMQEFFKDIVDVDFTAEMEDQLDRIES
GEEKWQNVIESFYVPFEKELKTAEQTIEKVKIEDEETDEKCELCGRNMVIKRGRYGKFLA
CPGFPECKNTKPLIEEVGAKCPLCGGNVVVRRTKKGRIFYGCANYPTCEFVSWDKPSGKQ
CPKCGSYMVIKNTKNGEIEICSNNECKYRESHQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtctttaatcatagtagagtctccggcaaaggccaaaaccataggtaaattt
ttgggcagaaatttcaagatacaggcttccatgggacatgtaagggacctgcccaaaagc
cagttgggtataaatattgagaaggggtttgcaccaaaatatataactatcaggggaaag
ggttccctcctggaaagtttaaaaaaggaagcctccaaagttgaaaaaattcttctggct
accgatcccgacagggaaggtgaggccatatcctggcatctggcgaatcttttgggcttg
ccggaagatgaaccatgcagggttgagtttcatgagattaccaaaaatgccgtttcagaa
tccattaaacatcccaggaaaataaacaaaaatctggtggaagcccagcaggccaggaga
atccttgaccggctcgtgggatataaaataagtcccatattgtggcgaaaagtaaaatgg
gggttgagcgccggcagagtacagtccgtggcagtaagaataatatgcgacagagaaaag
gaaatcagggagtttgtcaccagagaatactggaccatcgatgccagcctgtcggatgaa
aagacaggctccagaataaaggcccagttgcattccaaaagtgacaagaaattcgaaata
aataataagcaagaggctgacctgattttatctgaattaaaaaatgaaacttttatagtt
tcagaggtaaaaaaaagtgaaagaaaaagaaacccttcaccgccctttactaccagcagc
atgcagcaggaggccgccagaaaactgaaatttacagccaaaaagaccatgatggtagcc
cagcagttgtatgaaggccttgatataaaaggtgaaggaactgttggccttgtgacctat
attaggaccgattccaccaggatatccgaccaggctgtgaatgaggccagggattatata
aacaaaaatttcggcaaagaatatatttcagaaagaccgccggttcaaaaaaataaaaaa
aatatccaggacgcccatgaagccataaggccaacatcggttttcaggacaccggaaagc
gtcaaggactctctcacgagggaccagtacaggttgtataagctaatctgggagagattt
gtaagcagtcagatggctccggcggtatatgacaccgtttccgtggatataaaggcagga
caatatattttcaaggccacgggttcggtcttgaaatttcaaggttttatggctgtatat
atagaaagcaccgatgaagaggcagaaaaggaagaaggcagcttaccgcctcttgaggcg
ggccagttgttaaaacttataaagcttctacctgaacagcattttacacaaccgcctcct
agatatactgaagccatgctggtcaagactctggaagaaaaaggtataggaagacccagc
acctatgctcctatcattgatataatacaaaagcgcggttatgtggaaaaggaaaaaggc
aggtttaaacccacagaactgggtgagattgtggttcagatcatgcaggagttttttaag
gatatcgtagatgtggattttacagcagaaatggaagatcaactggatagaattgaatca
ggcgaagagaaatggcaaaatgtcattgaatctttttatgtcccttttgaaaaggagtta
aaaaccgccgaacaaactatagaaaaagtaaaaattgaagatgaggaaaccgacgaaaaa
tgtgaattatgcggtagaaatatggtgataaagcggggcagatatggaaaatttttagcc
tgtccgggatttcccgaatgtaaaaatacaaaacctctgatcgaagaagtcggagccaaa
tgccccctctgcggtgggaatgtggtagtcagaaggacaaaaaaaggcaggattttttat
ggatgtgccaattaccccacatgtgagttcgtttcgtgggataaacccagcggtaaacaa
tgccccaaatgtggaagctacatggtaattaaaaataccaaaaatggagagattgagata
tgttcaaacaatgagtgtaagtacagagagtcacatcaatga
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