Bacillus sp. H15-1: BSZ43_00355
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Entry
BSZ43_00355 CDS
T11355
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bach Bacillus sp. H15-1
Pathway
bach03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSZ43_00355
Enzymes [BR:
bach01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSZ43_00355
DNA repair and recombination proteins [BR:
bach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
BSZ43_00355
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
APJ25390
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Position
64742..68275
Genome browser
AA seq
1177 aa
AA seq
DB search
MNNIQSYITKSDDFKSIVNGLNEGLKEQLLAGLSGSARSLFTAALTKETRRPVFLITHNL
YQAQKITDDLTGLIKDQPVLLYPVNELISSEIAVASPELRSQRLDVLNRLASGETPIVVA
PAAAVRRMLPPVEVWQNSQIHIETGRDIDPEQLLQKLVQMGYERTDMVAAPGEFSIRGGI
IDVYSLTEENPVRIELFDTEVDSIRIFNTDDQRSLETRDEVTIGPAKELIVRDEDRQRAL
EQIDQGLANSLKKLKLDKQKEILDQNIAEDKERLKEGHIGQEMVKYLSYFYEKPASLLDY
FPKNTLLILDEISRIHEMEDQLQKEEAEWITSLLEEGKILHDTSMSFPFHSLISKQSRPI
LYYSLFLRHVQHTSPQNIVNVSSKQMQSFHGQMNVLKNEIERFKKSKYTTVFLGDSKERV
EKLASVLSDYDIEAAQADQDAALAQGQIYIMEGGLQSGFELPMIKLAVITEEELFKKRVK
KQARKQKLTNAERIKSYSELQIGDYVVHVNHGIGKYLGIETLEINGIHKDYLNIHYQGSD
KLYVPVDQIDQVQKYVGSEGKEPKLYKLGGSEWKRVKKKVESSVQDIADDLIKLYAEREA
SKGYAFSPDHEMQREFEAAFPYQETEDQLRSIHEIKRDMEKERPMDRLLCGDVGYGKTEV
AIRAAFKAIADGKQVAILVPTTILAQQHYETILERFQDYPINIGLLSRFRTRKEANETIK
GLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIKRIKANVDVLTLTAT
PIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNGALVREAIERELARGGQVYFLYN
RVEDIERKAEEISMLVPDAKVTYAHGKMTENELESVMLNFLEGESDVLVSTTIIETGVDI
PNVNTLIVFDADKMGLSQLYQLRGRVGRSNRVAYAYFTYRKDKVLTEVAEKRLQAIKEFT
ELGSGFKIAMRDLTIRGAGNLLGAQQHGFIDSVGFDLYSQMLKEAIEARKGDAPQAEKFE
PEIDLELDAYIPQTYVTDGKQKIDMYKRFRAISTIEEKSELQDEMIDRFGEYPKEVEYLF
AIAEAKVYAIKERVELIKQDKDAVRLTIDEKASAEIDGQKLFELGSKYGRQIGLGMEGKK
LKISIQVKNRKPEEWLETLLDILKGLQNVKKQTIASS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaatattcaatcctatataacaaaaagcgatgattttaaatccatcgtcaacggc
ttgaacgaagggctgaaggaacagctgcttgcggggctctccggatctgcccggtcgtta
tttacagccgctcttacaaaagaaacgagacggccggtatttttaattacgcataacctt
tatcaggctcaaaaaattacagatgatttaacagggctgataaaagatcagcctgtcctt
ttatatcctgtcaacgaattgatttcttctgaaatagcggtggcaagccctgagctgcgc
tcgcaaaggcttgatgtcttaaataggcttgcaagcggtgaaacgcctatcgttgttgct
ccggcagcagccgtcagaagaatgctgcctcctgtcgaagtatggcaaaacagtcagatt
cacattgagacggggcgcgacattgacccggaacagctgctccagaagctcgttcaaatg
gggtatgagcgtacagatatggtggcggcgccaggcgaattcagcatacgcgggggcatt
atcgatgtctactctttgactgaagaaaatcctgtccggattgaattgtttgatacagaa
gttgactcgattcgtatattcaatacggatgatcagcgctcactggaaacgcgcgatgaa
gtaacgatcggccctgcgaaggaactgatcgtgcgggatgaagacaggcaaagggcgctt
gaacaaatcgatcaaggccttgccaacagccttaaaaagctgaagctcgataaacaaaag
gaaattctcgaccaaaatatcgcggaagacaaagagcggctcaaggaagggcatatcggc
caggaaatggtcaaatacctttcttatttctatgagaagcctgctagtttactagattat
ttcccgaaaaataccttgcttatactagatgaaatcagccgtattcatgaaatggaagac
cagctgcaaaaggaagaggcagaatggattacgagcctgcttgaagaagggaaaatcctt
catgatacatcgatgtcatttccttttcacagcctcatttcaaaacagtcccgcccgatt
ttgtattactcgctgtttttaaggcatgtgcagcacaccagtccgcaaaacatcgtcaat
gtttcaagcaagcaaatgcagagctttcacggacaaatgaatgtgctcaaaaatgagatc
gaacggtttaaaaaatcgaaatatacgacggtttttctcggagacagcaaagagcgcgtc
gaaaaactagcatctgtactgtccgactatgacatcgaagccgcacaggccgaccaggat
gcagcgctcgcccaaggccagatttacattatggaaggcggtcttcaatccggttttgag
cttccgatgatcaagctggccgttatcacggaggaagagctgtttaaaaagcgtgtcaaa
aagcaggcgcgcaaacaaaaactgaccaatgccgaacggattaaaagctactcggagctt
cagatcggcgattatgtcgttcatgtaaaccacggtatcggaaagtatttagggattgaa
acgttggagatcaacggcattcataaggactacctgaatattcactaccagggaagcgac
aagctttacgtaccggttgaccaaattgatcaggtgcaaaaatacgtcggttccgaaggt
aaagagccgaagctttataaactcgggggaagcgaatggaaacgggttaagaaaaaggtt
gaaagctctgttcaggatatcgccgatgacttgatcaagctctatgccgaaagagaagca
agcaaaggctacgcgttttcacccgaccatgaaatgcagcgtgaatttgaagccgcattt
ccttatcaggagacagaggatcagctgagatcgatccatgagattaaaagagacatggaa
aaagaaagaccgatggaccggctcctttgcggcgatgtgggctacggcaaaaccgaagtg
gcgatccgcgccgcttttaaggcgattgcagacggaaaacaggtcgccatccttgtgccg
actacgatcctcgcacagcagcactatgaaacgatattggagcgctttcaggactacccg
attaatatcggtttgctcagccggttccggacgagaaaagaagcaaatgaaacgatcaag
ggcttgaaaaacggaacggtagacatcgtgatcggcactcacaggctgttgtccaaggat
gtcgtatacaaagatcttggtctgcttatcatcgatgaagaacaaaggttcggtgtcaca
cataaggaaaaaattaaacgcattaaagcgaatgtcgacgttttgacgttaacggcaact
ccgatacctcgaacccttcatatgtccatgcttggtgtcagagatttgtcagtcattgaa
acgcctccggaaaaccgcttcccggtacagacgtacgttgtcgaatacaacggggccttg
gtcagggaagcgatagaacgcgagctggccagaggcggtcaggtttacttcctgtacaac
cgggtggaggatattgaaagaaaagcagaagaaatctcgatgcttgtacctgacgccaag
gtgacgtacgcccatggaaagatgacagaaaacgaactcgaatcggtcatgctgaacttc
ttagagggagaatcggatgtactagtcagcacgacgattattgagacgggcgttgatatt
ccaaacgtcaatactttgatcgtatttgacgcagacaagatggggctttcccagctgtac
cagctgaggggccgcgtcggccgctcaaaccgtgtagcttacgcttattttacgtaccgg
aaggacaaagtcctaacggaagtggctgaaaaaaggcttcaggcgattaaagaatttaca
gaactcgggtcaggatttaaaatcgcgatgcgcgatttgacgatccgcggcgccggaaac
cttttaggtgcgcagcagcacgggttcatcgattctgtcggtttcgatttatattcgcaa
atgctcaaggaagcaatagaggcgcgcaagggagatgcaccgcaagctgaaaagtttgag
ccggaaatcgatttggagcttgacgcatatattccgcagacgtatgtgacagacggcaag
caaaaaatagatatgtataaacggtttagagcgatttcaaccattgaagaaaagagcgag
cttcaagacgagatgatcgaccgcttcggcgaatatccgaaagaagtagaatatttattc
gccatcgctgaggcgaaggtatatgccatcaaggaacgcgtcgagctgatcaaacaggat
aaagacgccgtcagactgacaattgacgaaaaagctagtgccgaaattgacggtcaaaaa
ctgtttgaactcggcagcaagtacggcagacagatcggccttggaatggaagggaagaaa
ttgaaaatctcgattcaagtgaaaaaccgaaaaccggaggaatggctggaaacgcttctc
gacatattgaagggccttcaaaacgttaaaaagcaaacgatcgcttcatcgtaa
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integrated database retrieval system
