Bacillus sp. H15-1: BSZ43_09275
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Entry
BSZ43_09275 CDS
T11355
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bach Bacillus sp. H15-1
Pathway
bach03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bach00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSZ43_09275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bach03019
]
BSZ43_09275
03016 Transfer RNA biogenesis [BR:
bach03016
]
BSZ43_09275
Enzymes [BR:
bach01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BSZ43_09275
Messenger RNA biogenesis [BR:
bach03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BSZ43_09275
Transfer RNA biogenesis [BR:
bach03016
]
Prokaryotic type
tRNA degradation factors
BSZ43_09275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
SPATA25
KH_N4BP1_2nd
Motif
Other DBs
NCBI-ProteinID:
APJ26971
LinkDB
All DBs
Position
1817425..1819542
Genome browser
AA seq
705 aa
AA seq
DB search
MGQEKHVFSIDWAGRKLTVETGQLAKQANGAVMVRYGDTAVLSTATASKEPKTVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSV
DQDCSSEMAAMFGSSLALCVSDIPFEGPIAGVTVGRVDNKFIINPTLEQLEKSDIHLVVA
GTKDAINMVEAGADEVPEEIMLEAIMFGHEEIKRLIAFQEEIVAAVGKEKSEITLYEIDS
DLKEKVRGMAESNLLKAIQVHEKHAREDAISEVKNEVLAKFEEEEHDEETLKQVKDILSQ
LVKNEVRRLITEEKVRPDGRAVDEIRPLSSEVGLLPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALEPIVPSEK
DFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGDNYTVLT
DIQGMEDHLGDMDFKVAGTSKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILESMLS
TLAESRKELSPYAPKILTMSINPDKIRDVIGPSGKQINKIIEDTGVKIDIEQDGTIFISS
TDESMNQKAKKIIEDLVREVEVGQLYLGKVKRIEKFGAFVELFSGKDGLVHISELALERV
GKVEDVVKIGDELLVKVTEIDKQGRVNLSRKAVLREQKEKEEQKS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagagaaacatgtcttttccatagattgggccggccgcaagctcacagtagaa
accggccagcttgcaaaacaagcaaacggagctgtcatggtgcgttatggagacactgca
gtgctcagcaccgcaacggcttcaaaagaacctaaaaccgtagactttttcccgttaacc
gtaaattacgaagaaagactttacgccgtcggaaagattccgggcgggtttattaaaaga
gagggaagaccgagcgaaaaagcgattctcgccagccggttaatcgacaggccgatccgc
ccgctgttcgcagacggcttccggaatgaagttcaagtcgtcagcatcgtcatgagcgtt
gaccaggattgttcgtcagaaatggcggcaatgtttggatcatctcttgcgctgtgcgta
tccgacatcccgtttgaagggccgatcgccggagtgacggtaggccgggttgacaacaaa
ttcatcatcaatccgacacttgaacagcttgaaaaaagcgacattcatctcgtcgtagcg
ggaacgaaggacgcgatcaacatggttgaagcgggagcagacgaagttccggaagagatc
atgcttgaagcgatcatgttcggtcacgaggagatcaaacggctgattgccttccaggag
gaaatcgtcgccgctgtcgggaaagaaaaatcagaaatcaccctgtatgagatcgattcc
gatctgaaagaaaaagtgcggggaatggccgaatcgaacctcttaaaagccattcaggtt
catgaaaagcatgcgcgcgaggacgcgatcagcgaagtgaaaaacgaggttttggccaag
tttgaagaagaggaacacgatgaagaaacgctgaaacaagtgaaagacattttgtcccag
cttgttaaaaatgaagtgcgccgtctgattacggaggaaaaagttcgtcctgacggcagg
gctgtcgatgagatccgcccgctttcttcagaagtcggactgcttccgagaacacacggt
tcaggactttttacaaggggacagactcaggcgctcagcatttgtacgctcggtgcgctt
ggcgatgtgcagattttagacggtctcggcgtcgaagaatccaaacgctttatgcaccat
tacaacttcccgcagttcagcgtcggggaaacagggccgatgcgcgggccgggacgccgc
gaaatcgggcacggagccctcggggaacgagcgcttgagccgattgttccgtctgaaaaa
gacttcccgtacaccatccgcctcgtctctgaagtgcttgaatcaaacggttccacttcc
caggcgagcatttgtgcaagcacgctagcgatgatggatgcaggggtgccgattaaagcc
ccggttgccggaatcgcgatgggtcttgtcaaatcaggtgacaactataccgtcttaacc
gatattcaaggtatggaagaccatctcggggatatggactttaaagtggcgggaacgtcc
aaaggcgtcacagctctgcaaatggatattaagatcgaaggcttatcgagagagattttg
gaagaggctcttcagcaggcgaaaaaaggcagaatggagatccttgaaagcatgctgagc
acattggctgaatcaagaaaagagctttctccttatgcgccgaaaatcttgacgatgtcg
atcaatccggataaaatccgcgacgtcatcggaccaagcggaaaacaaatcaataagatc
attgaagatacaggcgttaaaatcgatattgaacaagacggcacaatcttcatttcttct
accgatgaaagcatgaaccaaaaagcgaagaaaatcatcgaagaccttgtcagagaagtt
gaagtcggacagctttacttaggtaaagtgaagcggattgaaaaattcggagctttcgtt
gaactgttcagcggaaaagacggtcttgtccatatttcagagcttgcgctcgaacgggta
ggaaaagtcgaagatgtcgtcaaaatcggcgacgagctccttgtaaaggttactgaaatc
gataaacaaggacgcgtcaacttatcaagaaaagctgtactgcgtgaacagaaggaaaaa
gaagaacaaaaatcgtaa
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