KEGG   Bacillus sp. H15-1: BSZ43_09320
Entry
BSZ43_09320       CDS       T11355                                 
Name
(GenBank) Zn-dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bach  Bacillus sp. H15-1
Pathway
bach03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bach00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSZ43_09320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bach03019]
    BSZ43_09320
Messenger RNA biogenesis [BR:bach03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BSZ43_09320
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: APJ26980
LinkDB
Position
1827415..1829079
AA seq 554 aa
MKKNTENIRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGIDVVIPDISYLI
ERSDRVKAIFLTHGHEENIGGVFYCLNKLSVPVYGTKLTLALLKETLKQYGVNKKPDLRE
IHSKSVITFESTKVSFFKTNHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPVLNQTSDIGE
IAKIGNSGVLCLLSDSANAEKPGYTPSEALVGGEISDVMYNAENRVIIAVFASNFNRIQQ
VIDAALQNGRKLAVSGKNISAILQLAMKLGYVTADEDMFIPVQEVKKYPKREVAILTGDN
HGEPLAALTRIAKQGHKQLDIEEGDTVLIASSPIPGQELVYSKAVDLLTRAGAQVVFAQK
RVHVSGHGCQEELKLMLNLLKPKYLIPVNGEYRMQKAHSKLAEEIGMKRSDIFLIEKGDV
VEFRGQNVKIGDKVHSGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKKKKHLV
SGPEIITRGFVYVRESEQLIVEATELVRELVNESTENAVVEWSALKQTMREALNQFLYEK
TKRKPMIIPIIMEV
NT seq 1665 nt   +upstreamnt  +downstreamnt
ttgaaaaaaaatacagaaaatattagaatcatcgccttaggaggcgtcggagagatcgga
aaaaacctctatgtcattgaaatcgattcagacatattcgtggttgacgccggcctcatg
catccagaaaatgaaatgctgggtatcgatgtggtcatccctgacatttcttatttaatt
gaacgatctgaccgcgtaaaggcgatttttctcacacacgggcatgaagaaaacatcggc
ggcgtattttactgcctgaacaagctttctgtgcctgtttacggaacgaagctgacgctt
gcccttttaaaggaaacgctgaagcagtacggtgtaaacaaaaagcccgatttaagagaa
attcattcaaaatccgttattacatttgaatcgacaaaggtgtcattcttcaaaacaaat
cacagcatcccggattccgtcggtgtcagctttaaaacatccctcggatccatcgtgtgc
acaggcgattttaaatttgaccagacacctgtgttaaaccagacaagcgacatcggcgaa
attgccaaaatcggcaacagcggtgtgctgtgcctgctttccgacagcgccaatgccgag
aagccgggctatacgccttcagaagcactcgttggcggagagatatccgatgtgatgtac
aacgccgaaaaccgcgtgattattgccgtgttcgcgtctaactttaaccggattcagcag
gtgattgatgccgcgctgcaaaacggcaggaagcttgcagtttcagggaaaaatatttcg
gcgatactccagctggcgatgaaactcgggtatgtcacggcagatgaagatatgttcatc
cctgtccaagaagtcaaaaagtatccaaaaagagaagtcgcgattttgacaggggacaac
catggagagccgctcgccgcattgaccaggatcgcaaaacaagggcataagcagcttgac
attgaggaaggggataccgtcctgatcgcatcctcccctatcccgggtcaggagcttgtt
tactccaaagcggtcgatctcttaacgagagcgggcgcccaggtcgtattcgcacaaaaa
cgcgtccatgtatcaggccatggctgtcaagaagagctgaagctgatgctcaacttgctg
aagccgaagtatttaatccccgtaaacggtgaatacagaatgcaaaaagcgcattccaag
cttgccgaagaaatcggcatgaaacggagcgacattttcctgattgaaaaaggagatgtc
gtggaattccgcggacaaaacgttaaaatcggcgataaagtacactcaggcaatatattg
atcgacggactcggcgtcggcgatatcggcaacatcgtgctcagagaccgccgtctgcta
tcccaggacggaatcttaattgttgtgattacccttgataaaaagaaaaaacatctagtt
tcaggacccgaaattatcacgagaggttttgtctatgtcagagaatctgaacagctgatc
gttgaagcgacagagcttgtcagggaactcgtcaacgaaagcacagaaaacgccgtcgtc
gaatggtccgccttaaaacagacgatgcgtgaggcattaaaccagttcctatacgaaaaa
acgaaacgaaaaccaatgatcattccaatcatcatggaagtataa

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