Bacillus sp. H15-1: BSZ43_09320
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Entry
BSZ43_09320 CDS
T11355
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bach Bacillus sp. H15-1
Pathway
bach03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bach00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSZ43_09320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bach03019
]
BSZ43_09320
Messenger RNA biogenesis [BR:
bach03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BSZ43_09320
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
APJ26980
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Position
1827415..1829079
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AA seq
554 aa
AA seq
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MKKNTENIRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGIDVVIPDISYLI
ERSDRVKAIFLTHGHEENIGGVFYCLNKLSVPVYGTKLTLALLKETLKQYGVNKKPDLRE
IHSKSVITFESTKVSFFKTNHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPVLNQTSDIGE
IAKIGNSGVLCLLSDSANAEKPGYTPSEALVGGEISDVMYNAENRVIIAVFASNFNRIQQ
VIDAALQNGRKLAVSGKNISAILQLAMKLGYVTADEDMFIPVQEVKKYPKREVAILTGDN
HGEPLAALTRIAKQGHKQLDIEEGDTVLIASSPIPGQELVYSKAVDLLTRAGAQVVFAQK
RVHVSGHGCQEELKLMLNLLKPKYLIPVNGEYRMQKAHSKLAEEIGMKRSDIFLIEKGDV
VEFRGQNVKIGDKVHSGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKKKKHLV
SGPEIITRGFVYVRESEQLIVEATELVRELVNESTENAVVEWSALKQTMREALNQFLYEK
TKRKPMIIPIIMEV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaaatacagaaaatattagaatcatcgccttaggaggcgtcggagagatcgga
aaaaacctctatgtcattgaaatcgattcagacatattcgtggttgacgccggcctcatg
catccagaaaatgaaatgctgggtatcgatgtggtcatccctgacatttcttatttaatt
gaacgatctgaccgcgtaaaggcgatttttctcacacacgggcatgaagaaaacatcggc
ggcgtattttactgcctgaacaagctttctgtgcctgtttacggaacgaagctgacgctt
gcccttttaaaggaaacgctgaagcagtacggtgtaaacaaaaagcccgatttaagagaa
attcattcaaaatccgttattacatttgaatcgacaaaggtgtcattcttcaaaacaaat
cacagcatcccggattccgtcggtgtcagctttaaaacatccctcggatccatcgtgtgc
acaggcgattttaaatttgaccagacacctgtgttaaaccagacaagcgacatcggcgaa
attgccaaaatcggcaacagcggtgtgctgtgcctgctttccgacagcgccaatgccgag
aagccgggctatacgccttcagaagcactcgttggcggagagatatccgatgtgatgtac
aacgccgaaaaccgcgtgattattgccgtgttcgcgtctaactttaaccggattcagcag
gtgattgatgccgcgctgcaaaacggcaggaagcttgcagtttcagggaaaaatatttcg
gcgatactccagctggcgatgaaactcgggtatgtcacggcagatgaagatatgttcatc
cctgtccaagaagtcaaaaagtatccaaaaagagaagtcgcgattttgacaggggacaac
catggagagccgctcgccgcattgaccaggatcgcaaaacaagggcataagcagcttgac
attgaggaaggggataccgtcctgatcgcatcctcccctatcccgggtcaggagcttgtt
tactccaaagcggtcgatctcttaacgagagcgggcgcccaggtcgtattcgcacaaaaa
cgcgtccatgtatcaggccatggctgtcaagaagagctgaagctgatgctcaacttgctg
aagccgaagtatttaatccccgtaaacggtgaatacagaatgcaaaaagcgcattccaag
cttgccgaagaaatcggcatgaaacggagcgacattttcctgattgaaaaaggagatgtc
gtggaattccgcggacaaaacgttaaaatcggcgataaagtacactcaggcaatatattg
atcgacggactcggcgtcggcgatatcggcaacatcgtgctcagagaccgccgtctgcta
tcccaggacggaatcttaattgttgtgattacccttgataaaaagaaaaaacatctagtt
tcaggacccgaaattatcacgagaggttttgtctatgtcagagaatctgaacagctgatc
gttgaagcgacagagcttgtcagggaactcgtcaacgaaagcacagaaaacgccgtcgtc
gaatggtccgccttaaaacagacgatgcgtgaggcattaaaccagttcctatacgaaaaa
acgaaacgaaaaccaatgatcattccaatcatcatggaagtataa
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