Bacillus sp. 1NLA3E: B1NLA3E_06805
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Entry
B1NLA3E_06805 CDS
T02643
Name
(GenBank) phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
baci
Bacillus sp. 1NLA3E
Pathway
baci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1NLA3E_06805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baci03019
]
B1NLA3E_06805
Messenger RNA biogenesis [BR:
baci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B1NLA3E_06805
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AGK53125
UniProt:
N0AYM2
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Position
1484295..1485854
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AA seq
519 aa
AA seq
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MEPIAIISILLGVFVGAVVGYFIRKSIAEAKITGAKDAAEQILEDAKREAEALKKEALLE
AKDEIHKLRSEAEREVRERRNELQKQENRLLQKEENLDRKGESLDKREAQLERKDDSLNQ
RQQHIEEMESKVDEMVRMQQVELERISSLSREEAKVIILDRMEQELAHDTAIMIKESENR
VKEESDKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARLALEKLVQDGRIHPARIEEMVDKARREVDEHIRE
IGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSIEVAQLSGLLAAELGEDETLA
RRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEATSTIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESFEGVEKSFAIQAGREIRIIVKPDQIDD
LESHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaacctattgcgatcatctccattttgcttggcgttttcgtcggtgcggttgttggc
tattttattcgtaagtccattgctgaagcaaagattactggcgcaaaagatgcggcagag
cagattttagaagatgcgaagcgagaagcggaagcattaaaaaaggaagcactgttagaa
gcaaaggatgaaattcacaagcttcgatctgaagctgaacgtgaggttcgagaacgaaga
aatgaactacaaaaacaagaaaaccgtttgctgcaaaaagaagagaatctagatcgaaaa
ggcgaatcgttggataaacgtgaagcgcaacttgaaagaaaagatgattctctaaatcaa
agacaacagcatattgaagagatggaaagcaaagtggatgagatggtacgtatgcaacaa
gtggaattagaacgtatctcaagcctatctcgtgaagaggcgaaggttatcattttagat
cggatggaacaggaattagcgcatgatactgcgatcatgattaaagaaagtgaaaatcgt
gtgaaagaagaatcagacaagaaggcaaaagaaatcttgtcattagcgattcaaagatgt
gcagctgatcatgttgcagaaacaactgtttctgtagtaaaccttccaaatgatgaaatg
aagggccggattattggacgcgaaggacggaatatccgtacacttgaaaccttaacagga
attgacctcattattgatgacactcctgaagcggttatcttgtcagggtttgatcctatt
cgtcgcgaaactgccagattagcacttgagaagcttgtacaagacggacgtatccatcct
gcacgtattgaagaaatggtagataaagctcgtcgtgaagtcgatgagcatatccgcgaa
attggtgaacaaacaacgtttgaggtaggagtccatgggcttcatcctgatctaattaaa
attcttggtcgattgaagtatcggacaagttatggtcaaaatgtgttaaaacattcaatc
gaagtggctcagttatccggattattggctgctgagttaggggaagatgaaacattagcg
cgtcgtgctggattattacatgatattggtaaagcaattgatcatgaagtggaaggtagt
cacgttgaaattggggtagaacttgcaacgaaatacaaggaacacccagttgtaataaat
agtatcgcttcccatcatggagatactgaagcaacatcaactattgctgttctcgttgct
gctgcagatgctttatctgctgctagaccaggagctcgtagtgaaacactcgaaaactat
attcgtcgactcgaaaagctggaagaaatttctgagtcatttgaaggcgttgaaaaatcg
tttgcaattcaagcgggtcgtgaaattcggatcatcgtgaaaccagatcaaatagatgat
ttggaatcgcatcgattggcacgagatattcgcaaaagaattgaagaagaactcgattat
ccaggtcatataaaagtgacagttattcgtgaaacgagagctgtagaatatgcaaaataa
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