Bacillus sp. 1NLA3E: B1NLA3E_08640
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Entry
B1NLA3E_08640 CDS
T02643
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
baci
Bacillus sp. 1NLA3E
Pathway
baci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1NLA3E_08640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baci03019
]
B1NLA3E_08640
Messenger RNA biogenesis [BR:
baci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B1NLA3E_08640
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AGK53490
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Position
complement(1898220..1899893)
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AA seq
557 aa
AA seq
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MATTENKLSIFALGGINEIGKNMYVIQYANDIIIVDCGGKFPDESLLGIDLIIPDITYLE
ENQDKIRALIVTHGHEDHIGGVPFFLKKLNVPIYATRFTLGLIELKLDEHKLRRDTQLVQ
INSDSNLELGEINVSFFRVSHSIPDCLGVVFHTPEGNVVHTGDFKFDLTPVNSQHSDIHK
MAEIGNQGVLVLISESTNAERSGLTPSEQIIGGHMDEAFMKADGKIFISTFASNVNRLQQ
VVEASIKTNRKLALLGRSMVNVVSVAIEHGYLNVPEGMLIEANEVDKLAPEKVTILCTGS
QGEPNAALARLASGNYRDAAIYPGDTVIFAASPIPGNEKDVSRIIDNLFQLGAKVVYGSG
SSTGMHVSGHGYQEDLKLMLTLMKPTYFIPIHGEYRMLHHHRLLAESVGIEKGNTFNIKN
GDVVDVENSVARQTRQVPSGVTYVDGMGVGDVGEIVLRDRKQLSEDGMLVIVLTISKTDR
KIIQGPDTISRGFVYVKDSEDLIKEINRLVKKSVNDLQAENVRQWNVIKQSIKKSVGQYL
YSQTKRKPMILPIIIEI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaccactgaaaataaattatccattttcgccttaggtggcatcaatgaaatcgga
aaaaacatgtatgttatccaatatgctaacgatattattattgtcgactgtggtggtaag
tttccagatgagagtttattaggaatcgatttaattatccctgatattacctatttagaa
gaaaatcaggacaaaatccgtgcattaattgtgacccatggacacgaagatcatatcggt
ggtgttccttttttcttaaaaaaattaaacgtccccatttatgcaacccgttttacacta
ggtttgattgaattaaaattagacgagcataagctccgacgggatacgcaattagtccag
attaactcggattcaaatcttgagttgggtgagatcaatgtttcctttttcagagttagt
catagtattcctgattgtcttggcgtcgtcttccatacacctgaaggaaatgttgtccat
accggggacttcaaattcgatttaacacctgtaaatagccaacattctgatattcataaa
atggctgaaatcggcaatcaaggtgtcttagtattaatttcggaaagtacaaatgcagaa
cggtctggtttaaccccttcggagcaaattattggtggccatatggatgaagcttttatg
aaagctgatggaaaaatcttcatctccacctttgcttcaaatgtaaatcgcctacagcaa
gtcgttgaagcttcaattaaaactaatcgaaagcttgctttacttggtcgaagtatggtc
aatgttgtctcagttgcgattgaacatgggtatttaaatgttccagaagggatgctaatt
gaggcaaatgaagtcgataagctggcgcctgaaaaggttacgattctatgtacgggaagt
caaggagaaccaaatgcagcccttgcccgcctagctagcggaaactatcgggatgctgct
atctatcctggagacacagttatttttgccgcttcgccaatcccaggcaatgaaaaggac
gtttcacgtatcatcgacaacttgtttcaacttggcgccaaggttgtatatggatctgga
agttcaacgggaatgcatgtttcaggacatggttaccaggaagatttaaaactcatgctt
accttaatgaaacccacctattttattccaatccatggtgaatatcgaatgttgcatcac
caccgcttgttagctgaatcggttggaatagaaaaagggaacacttttaatattaaaaat
ggtgatgtcgttgatgttgaaaactcagttgcccgacaaactcggcaagtaccttcaggg
gttacatatgtagatgggatgggtgttggcgatgttggagagattgtattacgagaccgt
aaacaactttctgaggatggaatgctcgtgattgttttaacaattagtaaaacagaccgc
aaaattattcaaggtccagataccatttctcgtgggttcgtgtacgtaaaagattccgag
gatcttatcaaagagattaaccgtcttgtaaaaaaatccgttaatgacttacaagcagag
aatgttcggcagtggaatgtaatcaaacaaagtattaaaaaatcagtaggacaatattta
tactcccaaacgaagcgaaagccaatgatcctgccaatcattattgaaatttga
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