Bacillus sp. 1NLA3E: B1NLA3E_12265
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Entry
B1NLA3E_12265 CDS
T02643
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
baci
Bacillus sp. 1NLA3E
Pathway
baci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1NLA3E_12265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baci03019
]
B1NLA3E_12265
03009 Ribosome biogenesis [BR:
baci03009
]
B1NLA3E_12265
Enzymes [BR:
baci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B1NLA3E_12265
Messenger RNA biogenesis [BR:
baci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B1NLA3E_12265
Ribosome biogenesis [BR:
baci03009
]
Prokaryotic type
rRNA helicases
B1NLA3E_12265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_19
Inositol_P
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AGK54201
LinkDB
All DBs
Position
complement(2701025..2702689)
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AA seq
554 aa
AA seq
DB search
MGISEMLVEKLQESGVVTPTPIQEQAIPYVMKGNDIIAQAQTGTGKTFAFILPILEHLDP
EASHVQALIVTPTRELALQITGEFKKLINDLPGIDVLAVYGGQDVDKQLKKLKKNVQIVV
STPGRLLDHIRRGTVNLSEISSLVLDEADQMLQIGFLNEVEEIIDQTPASRQTMLFSATM
PPEIRTLARKHMREPKYIQVEKTQGPAQTVNQLAIHTVDRAKQATLIGLIEAHRPFLAVI
FCRTKRRVSKLYEALRSHGYKCDELHGDLSQAKREQVMKRFRDAEVQLLIATDVAARGLD
VEGVTHVYNYDIPLDSESYIHRIGRTGRAGMTGMAITLYASKDRPLLDLIEKELNLSIEK
QNLGNMEKTDDETVDRPNRSSSSQMERRGNRKGRSGRTEGPRRQGDKRSNKFEDPNITRD
RRGNLLKDSRSRTEVKGKKSEVPRQPRDRNEVRSEGARPARNRNEGARPQRSRNEAKSAD
SRPQRSRNEVKSADSRPQRSRNEVKSADSRPQRSRNEVKSAGSSPSRGRNEVKSQISRPS
KKRNDFKSQGPNNR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggtatatcagaaatgttagtggaaaaattacaggaatctggtgttgtcacaccgact
ccaatacaagaacaagctattccttatgtcatgaaaggaaacgatattattgctcaagca
caaactgggacaggtaaaacatttgcgtttattttgccaatcctcgagcacttagatcct
gaagcatcacatgttcaggcactcatcgtaactccaacaagagaattagccttgcaaatt
accggtgagtttaaaaaactaatcaatgatttaccaggaatagatgtgttggctgtttat
ggggggcaagatgttgataaacagttaaaaaaattgaagaaaaatgttcaaattgttgtc
agcacaccgggacgattattagatcacataagaagaggaactgttaacttatcggaaatc
tcctctcttgtccttgatgaagcagatcaaatgctacaaattggctttttgaacgaagta
gaggaaatcattgatcaaacaccagcaagtcgacaaaccatgttattctctgcgacaatg
cctcctgaaattaggacccttgctcgcaaacatatgcgggaaccaaaatatatccaagta
gaaaaaacacagggacccgctcaaacggttaatcaattggcgattcatactgtggacaga
gccaaacaagcaacgctgatcggactaattgaagcacatcgaccattcttagctgttatt
ttttgccgaacgaaacgaagagtaagcaagctttatgaagcacttagatcacatgggtat
aaatgcgatgagttacatggagatctgtcacaagctaaaagagaacaggttatgaaacga
tttagagatgctgaggtgcaattgctgattgctacagatgttgctgctagagggcttgat
gttgaaggggttacccatgtatacaactatgatattcctcttgattcagaaagctatatt
caccgaattggtagaacaggtagagcaggtatgaccggcatggcaatcacattatatgct
tctaaggatcgcccgcttcttgatttgatcgaaaaagaactcaatttatcaattgaaaaa
caaaatcttggtaatatggaaaagacagatgatgaaactgtggatcgtccgaatcgctct
tcctcaagccaaatggagagacggggcaatcgaaagggaagatcaggacgtactgaaggt
ccccgaagacaaggagataagcgtagtaataagtttgaggatcctaacatcacaagagat
cgaagaggtaatttgttaaaagattcacgaagcagaacagaagttaaaggtaaaaagtcc
gaggttccacgccaaccaagagaccgaaatgaagttaggtccgaaggcgcgcgtccagca
agaaatcgaaatgaaggtgcccgtccacagaggagccggaacgaagccaagtctgctgat
tcccgtccacagagaagccggaacgaagtcaagtctgctgattcccgtccacagaggagc
cggaacgaggtcaagtctgctgattcccgtccacagaggagtcggaacgaggtcaagtct
gctggttccagtccatcaagaggccgaaatgaggtaaagtctcagatttctcgcccttca
aaaaagcggaatgattttaagtctcaaggacctaataatagataa
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