Bacillus sp. 1NLA3E: B1NLA3E_13040
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Entry
B1NLA3E_13040 CDS
T02643
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
baci
Bacillus sp. 1NLA3E
Pathway
baci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1NLA3E_13040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baci03019
]
B1NLA3E_13040
03009 Ribosome biogenesis [BR:
baci03009
]
B1NLA3E_13040
Enzymes [BR:
baci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B1NLA3E_13040
Messenger RNA biogenesis [BR:
baci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B1NLA3E_13040
Ribosome biogenesis [BR:
baci03009
]
Prokaryotic type
rRNA helicases
B1NLA3E_13040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Com_YlbF
AAA_22
PIN_2
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
AGK54356
UniProt:
N0B125
LinkDB
All DBs
Position
complement(2873359..2874816)
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AA seq
485 aa
AA seq
DB search
MTKFSDFNLSEALEKALSQMGFEEPSPIQAQAIPVALSGKDIIGQAQTGTGKTTAFGVPL
IENCKVDEPAIQGLVLAPTRELAVQVAEELNRIGNTKGIRTLPIYGGQDINRQIRGLKNR
PHIIAATPGRLMDHIDRKTIRLQNIHTVVLDEADEMLNMGFIEDIEKILSGIPSERQTLL
FSATMPHRIKTLAEKFMKNPELVKVQAKEMTVGNIEQHYLEVQEKQKFDVLCSLLDIQSP
ELAIVFGRTKKRVDELVEGLIKRGYSAEGIHGDIPQTKRDQVIRRFKEQTIDIMVATDVA
ARGLDISGVSHVYNFDIPQDPESYVHRIGRTGRAGNKGLAVTFVSPREIDHLRVIENLTK
RKIDKMQVPSFRDVLVGNQQATINKIMKIVESEEFSEYKRAAENLLEDTDSVTLLAATLK
LLTKEPDATPVKLTAVEPLRSKKPQYDRDRNRRNDRARSNDRPRSGSSDRAPRNEKAKRR
SRPRP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaattttcagattttaacctaagtgaagcacttgagaaggcattatcccaaatg
ggctttgaagaaccatctccaatccaggcacaggctattcctgttgcattatctggtaag
gatattattggtcaagcccaaactggaacaggaaaaacaaccgcttttggagttccgtta
attgaaaattgtaaagttgatgaaccagctattcaggggcttgtactcgctccaacacgt
gaattagctgtacaggttgcagaagaattaaaccggattggtaatactaaaggtattcgt
acgttaccaatttacggtggtcaagatatcaatcgacaaattagagggctaaaaaatagg
cctcatattattgcggcgacacctggtcgattaatggatcacattgatagaaaaacaatt
cgtttgcaaaacatccatacagtcgtgcttgatgaagcagatgaaatgttgaatatggga
tttattgaggacattgaaaaaattctgtctggtatcccttccgaacgtcagaccttatta
ttttcagcaacaatgccacatcgtattaaaactcttgctgaaaagttcatgaaaaatcct
gagcttgtaaaagttcaagctaaagaaatgactgttggaaatatcgagcagcattattta
gaagtgcaagaaaaacaaaaatttgacgttttgtgtagcttattagatatccaatcacct
gaacttgcgattgtatttggtcgaacaaagaaacgcgtagatgagttggttgaaggtctt
attaaacgcggatattctgcagaaggaattcacggtgatattccgcaaacaaaacgtgat
caggtgattcgtcgctttaaagagcagactattgatatcatggtggcgacagatgttgcg
gcacgaggtctggatataagcggagtttcccatgtatataatttcgatatcccacaagat
ccagaaagttatgttcaccggattggaagaacaggacgcgcgggtaataaaggtttagca
gtaacatttgtttctccaagggaaatagatcatttaagagtgattgaaaaccttacgaaa
cggaaaattgataaaatgcaagttccaagttttagggatgtactcgttggaaatcaacaa
gccaccattaataagattatgaagattgtggaatccgaagaattcagcgaatataaaaga
gctgcagaaaacctgctagaggatactgattctgttaccttattagctgcaactttaaag
cttttaacaaaggaaccagatgctactccagtaaaattaacggctgtggagccactacgg
tctaaaaagccacaatatgaccgtgatagaaacagacgaaatgatcgtgctagaagtaat
gatcggccaagaagcggcagcagtgaccgggctccgaggaatgaaaaagctaaacgacgt
tcaagacctcgtccgtaa
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