Bacillus sp. 1NLA3E: B1NLA3E_16035
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Entry
B1NLA3E_16035 CDS
T02643
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
baci
Bacillus sp. 1NLA3E
Pathway
baci02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
baci00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B1NLA3E_16035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baci03021
]
B1NLA3E_16035
Transcription machinery [BR:
baci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1NLA3E_16035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2316
Pox_G7
Motif
Other DBs
NCBI-ProteinID:
AGK54951
LinkDB
All DBs
Position
complement(3477264..3478391)
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AA seq
375 aa
AA seq
DB search
MAEKPARSKEVDSEMTLEQMKDQLTLTGKKTGVLNYDDIAEKLAQFELDSHQMDEFYEFL
GDQGIELNGDSDDEDPSGPDLSKEDEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLS
AEEEINLATRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRE
PTPEEIAEDMDLTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaccagcccgttcaaaagaggttgattcagagatgaccctggaacaaatg
aaggaccagttaacactaactggtaaaaaaacaggtgtccttaattatgatgacatagca
gagaaattggctcagtttgaattagattctcatcaaatggatgagttttatgagttctta
ggggaccaggggattgaattaaatggagatagtgatgatgaggacccgagtggtccggat
ttatcgaaagaggatgaggaagagtttgacttaaacgacctcagtgtacctccaggtgtt
aaaatcaatgatccagttcgaatgtacttaaaggaaattggccgtgtcgatctactttca
gctgaagaggagatcaatttagcaactcgaattgaagaaggcgacgaagaagcaaaaaga
cgtcttgccgaggctaatctaaggcttgttgtcagcattgccaagcgttatgttggacgc
ggaatgcttttccttgatcttattcaagaaggcaatatggggctaattaaggcagttgaa
aaattcgattatcgaaaaggttttaaattcagtacgtatgctacatggtggattcgtcag
gccatcactcgagcaattgccgaccaagctagaacgattcgtattccagtgcatatggtt
gaaacaattaataaattgatcagggttcaaagacaattacttcaggatcttgggcgtgaa
ccaactccagaagaaattgccgaggatatggatttaactcctgataaggttcgtgaaatt
ttaaaaatagctcaagaacctgtatctttagaaactccaatcggggaagaagatgattcc
catcttggtgatttcatagaagatcaggatgccacatctccttctgagcatgctgcctac
gagttgttgaaagaacagctggaagatgtgctcgatacattgactgaccgtgaagaaaat
gtacttcgtcttcgttttggtttagacgatggccgcacaaggacacttgaagaggttggt
aaggtctttggtgttactcgggaacggattcgccaaattgaagccaaagcactacgaaaa
cttagacacccaagtcgtagtaaacgtttaaaggattttctagaataa
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