Bacillus sp. 1NLA3E: B1NLA3E_16225
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Entry
B1NLA3E_16225 CDS
T02643
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
baci
Bacillus sp. 1NLA3E
Pathway
baci03030
DNA replication
baci03430
Mismatch repair
baci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1NLA3E_16225 (holA)
03430 Mismatch repair
B1NLA3E_16225 (holA)
03440 Homologous recombination
B1NLA3E_16225 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baci03032
]
B1NLA3E_16225 (holA)
03400 DNA repair and recombination proteins [BR:
baci03400
]
B1NLA3E_16225 (holA)
Enzymes [BR:
baci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B1NLA3E_16225 (holA)
DNA replication proteins [BR:
baci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B1NLA3E_16225 (holA)
DNA repair and recombination proteins [BR:
baci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B1NLA3E_16225 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DUF1848
DNA_pol3_gamma3
DNApol3-delta_C
TPR_SusR
YbaJ
CO_dh
Motif
Other DBs
NCBI-ProteinID:
AGK54989
LinkDB
All DBs
Position
complement(3513894..3514916)
Genome browser
AA seq
340 aa
AA seq
DB search
MVFDLWKQIKKKQISPLYLLFGTETFFINETKQLLIKHALDEDESDFNFSAYDLEETPIE
VVLEDAETLPFIGDRRLILVHNPVFLTAEKTKEKVEHNLSKLEAYLKHPAPFSVLVFIAP
YEKLDERKKLTKELKKTAVTFESKKLSQPELKKWIQERASLHQVQITDGAADRMIELVGA
NLFMLTSEMDKMALFANESRLIDEGIVESLASKSLEQNIFTLIDKIVSRNVQEALRIYYD
LLKQNEEPLKILAIIAGQFRLIYQVKELARRGYGQQQMAGFLKTHPYRVKLAAGHARQFS
DEELTKMIDLLADADYQMKTGGMNKEMLIEMFLLRLNHPN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttggtttttgatttatggaaacaaattaaaaaaaagcaaatctctccattatatttatta
tttggaacggagacgttttttataaatgaaactaaacaactgttaataaagcatgcctta
gatgaggacgagtctgattttaatttttctgcttatgatcttgaagagaccccaattgaa
gttgtccttgaggatgcggaaacgttaccgtttattggagatagacgcctcatcctagta
cataatccagtttttctaacagctgaaaaaacaaaagaaaaggtcgaacataatctatct
aagcttgaggcataccttaagcatccagccccattttcggtgttagtatttatcgcacca
tatgaaaagttagatgaacggaaaaaattgacgaaggaactgaagaaaacggcagttacg
tttgagtcaaaaaaattgtctcaaccagaattaaagaagtggatacaggagcgtgcttca
ttgcatcaggttcaaataaccgatggtgctgctgacagaatgattgaacttgttggtgcc
aacctatttatgctgacgagtgaaatggataaaatggctttatttgctaatgagtctagg
ttaattgatgaagggattgttgaaagtctagcttcgaagtctttggaacaaaatattttt
actttaattgataaaatcgtgagtcgcaatgtccaagaggcattgcggatttattatgat
ttgttaaaacaaaacgaagaacctttaaaaatactagcaatcattgctggtcaatttagg
ttgatttatcaagtgaaggagcttgcaaggcgaggttatgggcagcagcaaatggcgggt
ttcttaaaaacacatccatatcgagtaaaacttgccgcagggcatgcaaggcagttttca
gatgaggaattaacaaaaatgattgatttattagctgatgcagattaccaaatgaaaaca
ggtggcatgaataaagagatgttgattgagatgttcttacttcgtttaaatcatccgaat
taa
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