Bacillus sp. 1NLA3E: B1NLA3E_16435
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Entry
B1NLA3E_16435 CDS
T02643
Name
(GenBank) recombinase D
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
baci
Bacillus sp. 1NLA3E
Pathway
baci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1NLA3E_16435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baci03400
]
B1NLA3E_16435
Enzymes [BR:
baci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B1NLA3E_16435
DNA repair and recombination proteins [BR:
baci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1NLA3E_16435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
AAA_12
UvrD_C
AAA_22
HHH_5
nSTAND3
AAA_5
AAA
T2SSE
AAA_16
NTPase_1
NPHP3_N
AAA_18
AAA_28
DUF4926
AAA_17
TsaE
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGK55031
UniProt:
N0B383
LinkDB
All DBs
Position
complement(3554081..3556501)
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AA seq
806 aa
AA seq
DB search
MEQQNSLDLFSNQGKFIKGKHLVTIFHNEQNLYTVMRIRVEETNETYEDKEAVITGYFPR
VHEQESYIFYGEMKEHPRFGLQFHATHFRKDMPQSKQGVINYLSSELFKGIGKKTAEKVV
ETLGENTISKILNEPSLLDSIPKLPPERAKLLYDTLMEHQGLEQIMVALNQYGFGPQISM
RIYQVYKEETLEKIQKNPYQLVEDIEGIGFGRADELGHQLGITGSHPDRIKAGCHYTLEN
QSIQAGHVYVEASSLLDRVKTLLEENQRDIIEFADISAEVIKLAEEGKIIIEDQRVYLPS
LYFAEKGIVKHMKRIMAQTEYANQFPESEFLLALGQLEERISVQYAPTQKEAIQTALMSP
MLILTGGPGTGKTTVIKGIVELYAELHGCSLDTKDYKKEEPFPFLLAAPTGRAAKRMSES
TGLPAVTIHRLLGWNGTEGFDHHEDNPLEGKILIIDETSMVDVWMANQLFKALSETIQVI
LVGDEDQLPSVGPGQVLKDMLRSGVIPLVRLTDIYRQAEGSSIIELAHEIKRGRVPQQIS
IQQKDRSFIRCSTGQMADVVEKVVLNAKKKGFTARDIQVLAPMYRGVAGVDRLNVLLQEI
FNPNPDGTRKELLFADIKYRIGDKVLQLVNQPENNVFNGDIGEVVSIFFAKENVEKQDML
IVSFEGTEVTYTRQDLNKLTHAYCCTVHKAQGSEFPIVILPVVKSYYRMLRRNLIYTAIT
RSKQFLILCGEEEALRIGVERADDQARNTTLTEKLQEALQFNSHEAKEQIPVPNETLDGQ
EISYEAMLMEVDPLIGMDEATPYDFM
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaacaaaactcgctcgatttgttttcgaatcaagggaaatttatcaagggtaaa
catcttgttacgatttttcataatgaacaaaatttatatactgtaatgagaattcgcgtt
gaggaaacaaacgagacgtatgaggataaggaagctgtgattaccgggtatttcccccgg
gtccatgaacaagaatcatatattttctatggcgaaatgaaagaacaccctcgatttggt
ctccaatttcatgctacccactttcgaaaagacatgcctcaatctaaacagggtgttata
aattatttgtccagtgaactatttaaagggattggaaagaagacagcggaaaaggttgtt
gaaaccctaggggaaaacacgatttctaaaattttgaatgaaccgtctctgcttgattct
attccaaagttgcctccggagcgagctaagcttctttatgacacactcatggaacatcag
ggtcttgagcaaatcatggtcgcattaaatcagtatgggtttgggccacaaatctcaatg
agaatctatcaggtctataaagaagagacactagaaaagatccaaaaaaatccctatcag
cttgtagaagatatcgaaggaatcggtttcggtagagcagatgagttagggcaccaactc
ggtattacaggatctcatcctgaccgtatcaaggctgggtgccattatacacttgaaaat
caaagcattcaggcgggccatgtatatgtcgaagcttctagtttattagatcgagtcaaa
acactacttgaagaaaatcaacgagatatcatagagtttgcagatatatccgcagaagta
attaaactggctgaagagggaaaaatcatcatagaggaccagcgtgtttatttaccatcg
ctttatttcgcggaaaagggaatcgttaagcacatgaaacgaatcatggctcaaactgaa
tacgcgaaccagtttccagaatcggaatttttgctagccttaggccaacttgaggagcgc
atcagcgttcaatatgctccaacccaaaaagaggcaattcaaacggcactcatgtcacca
atgttaattttgacaggtgggccagggacagggaaaacaacagtcataaaaggaattgtc
gagctttatgctgagcttcatggttgttccctggatactaaggactataaaaaagaagag
ccttttccatttttgcttgctgcaccaactgggcgtgccgccaaacggatgtcagagtca
acaggacttcctgctgttacgatccaccgtttacttggatggaatgggacagagggcttt
gatcatcatgaggacaatcctttagaagggaaaatccttatcatcgatgaaacttcaatg
gttgatgtatggatggccaatcaattatttaaggcgttatctgaaaccattcaagtgatt
ctcgttggtgatgaggaccaactaccatcggttggacccgggcaggttcttaaggatatg
ctccgctcaggtgtcatccctttggttcgcttaaccgatatatacagacaagcagaggga
tcatcgattattgaacttgcacatgaaatcaagcgaggacgggttccgcaacaaatatca
atccaacaaaaggatcgctcgtttattagatgttctacaggtcaaatggctgatgttgtg
gaaaaagttgtgctgaatgctaagaagaaaggttttaccgcgagggatatccaagttctt
gcaccaatgtatcgaggtgtagctggggttgatcgcttaaatgttttgttgcaggaaata
ttcaatccaaatcccgatggtacgcgcaaagagcttctgtttgctgatataaaatatcgg
attggtgataaggttctccaacttgtaaatcagccagaaaataatgtatttaacggtgat
attggagaagtcgtttcgattttttttgcaaaagaaaatgttgaaaaacaagatatgctg
attgtctcctttgaggggacagaggtaacttatacgcgtcaagatttaaataagttaacg
catgcctattgttgtactgttcataaagcgcagggaagtgagttcccgattgttattctt
cctgttgtcaaaagttattatcgtatgctaagacggaacttaatttatacagcgattacg
agaagtaaacaattccttattttatgcggcgaggaagaggctcttcgtatcggggttgaa
cgggctgatgatcaagctagaaataccactttaactgaaaaacttcaagaggcattgcaa
tttaatagccatgaagccaaggagcaaataccggtcccaaatgaaaccctagatggacaa
gaaatttcctacgaggctatgttaatggaagtggatccgttaattgggatggacgaagct
accccgtatgactttatgtaa
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