Bacillus sp. 1NLA3E: B1NLA3E_19290
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Entry
B1NLA3E_19290 CDS
T02643
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
baci
Bacillus sp. 1NLA3E
Pathway
baci02020
Two-component system
baci02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
baci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B1NLA3E_19290
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B1NLA3E_19290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baci03021
]
B1NLA3E_19290
Transcription machinery [BR:
baci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1NLA3E_19290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_11
HTH_23
Sigma70_r4_2
Sigma70_r4
MarR
HTH_IclR
Fe_dep_repress
HTH_20
HTH_5
HTH_21
HTH_Crp_2
MarR_2
RXLR_WY
Motif
Other DBs
NCBI-ProteinID:
AGK55602
LinkDB
All DBs
Position
complement(4160234..4161550)
Genome browser
AA seq
438 aa
AA seq
DB search
MDLKAGLWQQQTLKLAMTQELSQAIALLQFSSIELVDFLESKALENPLLQFESSKIDVYR
QKKRGMGLKTSDKAWIEQISDQRFTLTDHIYPQIQDMTMSPHLRKVVTHFIDHLDDNGYF
TGDLKELSDHFHLSLAEAESCLSILQQVEPAGIGARHLQECLLLQIRRQSPINHRAETIV
SDYFKMFAEKKWKGLSKILSIELKEIQQVSDYILTLNPKPGAAFHYERAPYVIPDVMVVH
DGEQFVVRLFDNILPKIQFNKEYFKNLTSYQDQKVTEFLHDKQQDYHWIIRSIEQRQRTI
VNVTSKIVDKQQEFFKKGPDFLKPMTMKEIAEDLEIHESTVSRTVREKYVQTPFGTVELK
TFFTNAIESVSNESISSNTVKTAMEKLFKAENKQKPFSDLEMVQLLKEQEGIDVSRRTIA
KYREQLGIPSSSKRKRFD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaagcaggattatggcagcaacaaactttaaagctagcaatgacgcaagaa
ctttcacaggccatcgcacttttacaattttcaagcattgagcttgtcgatttccttgaa
agcaaggcactggaaaatcctttattgcagtttgaaagtagcaaaattgatgtctaccgc
cagaaaaaacgagggatgggtctaaaaacctctgataaagcctggattgaacaaatcagt
gatcagcggtttaccttgacagatcacatatatcctcaaattcaggatatgactatgtct
ccacatcttcgcaaggttgtaacacattttattgatcacttggatgacaatggttatttt
acaggagatttaaaagagctttccgaccattttcatctttcattagctgaggcagaaagc
tgcttatcaattttacaacaagtcgagccagctggaattggggcacgtcacttacaggaa
tgcttacttttgcaaattcgtcggcagtcccccataaatcatcgagctgagaccattgtt
tctgactactttaaaatgtttgcagaaaaaaagtggaaagggctatcgaaaatcctctcc
attgaattaaaggaaatccaacaagtatctgattatattttaactttaaatccaaagcct
ggggcagctttccattatgaaagagcgccatacgtcattccagatgtaatggtcgttcat
gatggcgaacagtttgtcgtccgattatttgataacatccttccgaaaatccaattcaat
aaggaatactttaaaaatttaacttcgtatcaagatcagaaggttactgagttccttcat
gataagcaacaggattatcattggattatccggagcattgaacaacgtcaaagaacaata
gtcaatgtgactagcaaaatagtagataaacaacaggaattttttaaaaaaggccctgat
tttctaaaaccaatgacaatgaaagagatagctgaagacctagaaatacatgaatcaaca
gttagtagaaccgtgcgcgaaaaatatgtgcaaactccatttgggacagttgaactcaaa
acattttttacgaatgcaatcgagtcagtgtcaaatgaatcgatatcatcaaacacagta
aaaacagcgatggaaaaattatttaaagctgaaaacaaacagaagcctttttcagattta
gaaatggttcaacttttaaaggagcaagaagggattgacgtttcgcgaagaacaatcgca
aaatatcgagaacagttaggaatcccctcatcttccaaaagaaaaagattcgactag
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