Bacillus sp. 1NLA3E: B1NLA3E_21590
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Entry
B1NLA3E_21590 CDS
T02643
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
baci
Bacillus sp. 1NLA3E
Pathway
baci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1NLA3E_21590 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baci03021
]
B1NLA3E_21590 (rho)
03019 Messenger RNA biogenesis [BR:
baci03019
]
B1NLA3E_21590 (rho)
Transcription machinery [BR:
baci03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B1NLA3E_21590 (rho)
Messenger RNA biogenesis [BR:
baci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B1NLA3E_21590 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
NACHT
AAA_22
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
AGK56056
LinkDB
All DBs
Position
complement(4666417..4667658)
Genome browser
AA seq
413 aa
AA seq
DB search
MKLKELYELARELKVSYYSKLTKKELIFAILKVRAEQQGYFFMEGVLEIIQSEGFGFLRP
INYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKESERYFGLLHVEAVNGDNPESAKE
RVHFPALTPLYPDRLMRLETTQKHLSTRIMDILAPVGFGQRGLIVAPPKAGKTMLLKEIA
NSITTNHPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIKVAELVLERAMR
LVEHKRDVIILMDSLTRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGS
LTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPALDIRRSGTRKEELLL
PKEQLDKLWAIRKSMTDSPDFAEKFIKKLRQTKSNEDFFAILGEEIKSRPGRS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaggaactttatgagttagctcgtgagttgaaggtctcgtattacagtaaa
ttgacaaaaaaagaactaatttttgctatattaaaagtacgtgcagaacaacaaggctat
ttctttatggaaggcgttttagaaatcattcagtctgagggctttggctttttaaggccg
attaattactcgccaagctcggaggatatttatatttctgcttcacaaatccgtcgcttt
gacttgagaaacggggacaaagtttctggtaaagttcgtccgccaaaagaaagcgaacgt
tattttggtttgttacatgttgaagccgttaatggtgacaatcctgaatcagctaaggaa
cgagttcacttcccagctttaacgcctctttatccggatcgattaatgcgtttggaaaca
actcaaaaacatttatcaactaggatcatggacattctggctccagtaggcttcggtcaa
cgtggtttgattgtagctcctccaaaagcgggaaaaaccatgctgttaaaagaaattgcc
aatagcattactactaatcacccagaagccgagctcatcgtgttattaatcgatgaacgc
ccagaggaagtaaccgatatcgagcgctccgttgctggtgatgttgttagttcaaccttt
gacgaggttccagaaaaccatattaaagtggctgagcttgtgcttgaacgtgccatgaga
ctcgttgagcacaaacgcgatgttattatattaatggatagtcttacgcgtcttgcccgc
gcctataacttggttattccaccaagcggccggactttatccggagggattgacccagct
gcattccaccgtccaaaacgtttttttggggcagctcgaaatattgaagagggtggcagc
ttaacgattttagcaacagcgcttgtcgatactggttcacgtatggatgatgttatttat
gaagaatttaaagggacagggaatatggaactgcatcttgaccgctcattggcagagcgc
agaattttcccagcattggatattcgccgttcgggaactcggaaagaagagctcctactt
ccaaaggaacaattggacaaactatgggcaatccggaagtcaatgaccgattcaccagat
tttgccgaaaagtttatcaaaaaattaagacagacgaaatcgaacgaggatttctttgcc
attcttggggaagaaataaagtcaagaccaggtcgttcgtaa
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