Bacillus sp. 1s-1: CJO35_05905
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Entry
CJO35_05905 CDS
T11357
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bacj Bacillus sp. 1s-1
Brite
KEGG Orthology (KO) [BR:
bacj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacj03400
]
CJO35_05905
DNA repair and recombination proteins [BR:
bacj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJO35_05905
Archaeal homologous recombinant proteins
CJO35_05905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ASV14708
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Position
1165250..1168642
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AA seq
1130 aa
AA seq
DB search
MKPISLSIKGLHSFRQEQVIDFERLCDAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
NNTHGILNHAEDELAVSFTFKLQTGHETAYKVERVFKRTDAVKVKTSICRFIEMKEEQIV
LADKANEVNRKIEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRQMLQRLFNLEQYGD
RLVKKLKKQAQTAQARKNEMLAEQAGLGDAGEEALKQAEQHLEEAESLLQSKKRERDAEA
QRFAEYQEIWNLQQEKESYLKKEAELLKKQEQIREKESRLHLAETANTLKPYADALLAAR
EDAERAHREEKQAREQLEQYEELHKKTEREYEDFRRLKNEKEPELLKQEEQLTALKEIEN
KRLAAQAEAEKKQREQRLKEEEIKHAADELAKVKSLLERGTAKQNQLKAELKSVQVSSEE
RKNCRNANQLAFHIQQLNNDAALEKERLGQQETLIKELQQEQQAVDQKVKAETERIEALF
AAVERAYALVCETDRSLSETIRVASQKKEEIAAKREQANRDQLAIELAKQLKDGEPCPVC
GSVHHEMPARVGIESLSFKEADSELEKTEAIIAEAGALAQEFLSAKVALEQQSDHLVSEC
PFLVKSKHELPETAASIEEGTIPERYNRISFEWKGIRQDLAETKSRMSKLLHTYKELCKK
RDQISERLSHEEKERNRLQNRVGELNDQLNERRKSFGEQFDGLSYEQAEKWQKTIEEKDL
AAEEFEKRIETSVGFLTKHEQQKEKLTERLFALDKEKLDLRYAVESLNKEINDYQKELMG
YPDTAAIDKKLQDVKTQLAKLHEQEQTLYGRLKETESEVSRLRGQTKGCELALREAEARL
AKAADIWQEKSGGTPFEKASEVKASILDRDDLARLKEDIQMHWDQTKQCESNIKRITEKL
DGRSVSEESWEKAAVTKDKAEEAFSKALEERGAAGKALAVIRENHKRFKELEASLAEWQT
YIDRLDKLQAVFKGNSFVEYLAEEQLESVTRDASARLGELTRQRYAIEVDSEGGFVMRDD
ANGGVKRPVTSLSGGETFLTSLALALALSAQIQLRGEYPLQFFFLDEGFGTLDQDLLDTV
VTALEKLQSDNLSVGVISHVQELRARLPKKLIVHPAEPSGKGTAVSLEMI
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatttctctgtctattaaggggctgcacagtttcaggcaggagcaggtgatc
gattttgagcgcctgtgcgatgccggtgtattcggcatcttcgggccgaccggaagcggc
aagtcgtcgattcttgacgcgatgactctcgctttgtacgggaaggtggagcgggccgcc
aataatacgcacggcattttgaaccatgccgaagatgagcttgccgtatcgtttacgttt
aagctgcagacaggccatgagacggcttataaagtggaacgggtctttaagcggacagat
gccgtcaaggtcaaaacatcgatctgccgcttcattgaaatgaaagaggaacaaatcgtt
ctggccgataaagcgaatgaagtaaaccggaaaatcgaagagctgctgggcttgacgatc
gacgattttacaagggcagtcgtcctgccgcaaggtaaattcgccgaatttctttcctta
aaaggagcggagcggcggcagatgcttcagcgcctgttcaacctcgaacaatacggggac
aggctcgtcaaaaaactgaagaaacaggcgcaaacagcgcaggccagaaaaaatgagatg
cttgccgagcaggctggattgggcgatgcgggggaagaggcgctgaaacaggcggaacag
catctcgaagaagctgaaagccttttgcaaagcaagaagcgcgaacgagacgcagaagcg
cagcgctttgcggagtatcaggagatttggaacctgcagcaggaaaaagaaagctatctg
aaaaaagaggcggagcttttaaagaaacaggaacagattcgggaaaaagaaagccgcctg
cacctcgccgaaacggcaaatacgctcaagccttatgcagacgccttgctggcagcgcgg
gaagatgccgaacgcgcacaccgggaagaaaaacaagcgcgggaacaattagaacaatat
gaagagcttcataaaaaaacagaacgcgagtacgaggatttcaggcgtcttaaaaatgaa
aaggaaccggagcttctcaagcaagaagaacagctcaccgctttgaaggaaattgaaaac
aagcggctagccgcacaggccgaggccgagaagaagcagcgcgaacagcgtttgaaagaa
gaggaaatcaagcatgcggcagacgagctggccaaggtgaaaagtctgcttgaacgcggg
acagccaagcagaatcagctgaaagcggagctgaaatctgtccaggtatctagcgaagag
cgtaaaaactgccgaaatgccaatcagcttgcttttcacattcaacagcttaacaacgat
gccgctttagaaaaggaacggcttggtcagcaggagacgctgattaaagagctccagcaa
gaacagcaagcggtggatcaaaaggtaaaagctgaaaccgaacgcatcgaggcattgttt
gccgctgtcgaacgagcgtacgcgctcgtttgcgaaacagacagatcgctctctgagacc
atccgtgtggcatctcaaaaaaaagaagagattgcggcaaaacgggaacaggcaaaccgt
gatcagctggcaatcgaactggcaaagcagctcaaagacggagagccttgtccggtctgc
ggatctgtacatcatgaaatgcccgcccgcgtcggcatagaaagcctgtcctttaaagag
gcggattccgaactggagaaaacggaagccatcatcgctgaagccggtgcgctggctcag
gagtttctctcggccaaagtggcactcgaacagcaatccgaccacctggtgagcgaatgc
ccgtttttagtcaagagcaaacatgaactgcctgaaaccgctgcatcgatagaagaaggc
accattcccgaacggtacaaccgcatcagctttgaatggaaaggaatcagacaggatctc
gcagagacaaaaagcaggatgtccaagctccttcacacatataaagagctctgcaagaaa
cgcgaccaaatcagcgagcgactcagccatgaagaaaaggagcgtaacaggcttcaaaac
cgcgtcggcgaattaaatgaccagttaaatgaacgccgaaaaagcttcggcgaacaattc
gacggcctctcttatgaacaggctgaaaaatggcaaaaaacgattgaagaaaaagatctg
gccgcagaggaattcgaaaagcgtatcgaaacgagcgtcggctttctcacaaaacatgaa
cagcaaaaagagaagctcaccgagcgcttgtttgcgcttgataaagaaaagctcgacctc
cgctatgctgtcgaaagccttaataaagaaataaacgattatcaaaaagagctgatgggc
tatcccgatacagctgcaatcgacaaaaagcttcaagacgtgaaaacgcaattggccaag
ctgcatgagcaggaacagacgctttacggacggctcaaagagaccgaatccgaagtcagc
cgtttaagaggacagacaaaagggtgtgagctcgctttgcgtgaagcggaagcaaggctt
gcgaaagcggcggacatctggcaggaaaaatccggaggtacaccgtttgaaaaggcctct
gaagtgaaagcgagcattttagaccgcgatgatcttgcccggctgaaagaagacattcaa
atgcattgggatcagacaaaacagtgcgagtccaatatcaagcggattacggaaaagctt
gatgggagatcggtttctgaggagagttgggaaaaagccgccgtcacgaaggacaaagct
gaggaggcattcagcaaagccttggaagaaaggggcgcggccggcaaagctctcgccgtc
atccgcgagaaccataaaaggtttaaggaacttgaagcatcattggctgaatggcagaca
tacatcgaccgtcttgataaactccaagccgtctttaaaggaaacagctttgttgaatac
ttggcagaagagcagcttgaaagcgtcacaagagacgcatctgcaagactcggcgaactg
acaagacagaggtatgcgattgaagtcgactcagaaggcggttttgtgatgagggacgat
gccaacggcggagtcaagcgccctgttacgagtctgtcaggtggggagacgtttctgact
tcactggcgcttgcgcttgcactttcggcacagatccagcttcgcggagagtatccgctc
caattcttctttttggacgaagggtttggcacgcttgatcaggatttgctggatacggtc
gtgaccgcattggagaagcttcagtctgacaatctgtcggtcggtgtgatcagccacgtt
caggaacttcgggccaggctgccgaagaagctgattgtgcatccggctgaaccaagcggc
aaaggtacagccgtatcgcttgaaatgatttaa
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