Bacillus sp. 1s-1: CJO35_10990
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Entry
CJO35_10990 CDS
T11357
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bacj Bacillus sp. 1s-1
Pathway
bacj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJO35_10990 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacj03019
]
CJO35_10990 (recQ)
03400 DNA repair and recombination proteins [BR:
bacj03400
]
CJO35_10990 (recQ)
Enzymes [BR:
bacj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJO35_10990 (recQ)
Messenger RNA biogenesis [BR:
bacj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CJO35_10990 (recQ)
DNA repair and recombination proteins [BR:
bacj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CJO35_10990 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ASV17696
LinkDB
All DBs
Position
complement(2137152..2138933)
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AA seq
593 aa
AA seq
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MLEKAEALLQHYFGYPSLRPGQKKAIQSVVSESRDTACIMPTGGGKSICYQIPALLMEGT
TIVISPLISLMKDQVDALNQLGIQAAYVNSSLGHNEIAERLSVFKEGGYKLFYVTPERLT
SPEFIRAISHIHIPLVAIDEAHCISQWGHDFRPSYRHIEGFLNSLGTRPVVLALTATATP
EVHEDICTQLGIEKENTVFTGFSRDNLTFKILKGENRDRFIESYVEKNRSEAGIIYTATR
KEAERISSRLSQKGIAAGCYHGGMDDEERDRQQDLFLNDEISVMTATSAFGMGIDKSNIR
YVIHAQIPKNMESYYQEAGRAGRDGLDSECILLFSPQDIRLQRFLIEQSTEDEDIRAQDV
KKLRQMVDFCHTEGCLERFILSYFGEVPTEDCGRCGSCLDTRSITDVTKEAQMVLSCIIR
MGERFGKTMVAQVLAGSKNKKVTENGFQQLSTYGILKKRSIADISDFIEFLIADEYIKMS
DGAYPVLFVANKGRNVLLGREAVMRKEKMQTNQIVKDDELFERLRALRRKLAQEQGVPPF
VVFSDETLREMSGKVPLTDEELLSVKGVGEQKRVKYGAVFLQELQAYKTEKEA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgctagagaaagccgaagcactattgcagcactattttggctatccttcactgcgcccg
gggcagaagaaagccattcaatctgtcgtttctgaaagtcgagatacagcatgcattatg
ccgacgggcggaggcaaatcaatctgctaccaaattcccgcgctccttatggaagggaca
accattgtgatctctcctttaatttccttgatgaaggaccaggtggatgctttaaatcag
cttggaattcaagctgcgtacgtgaacagttctttaggccataacgaaatcgctgagcgg
ctctccgtatttaaggaaggcggctacaagctcttttatgtaacacctgagcggctgacg
tctcccgaattcattcgcgcgatttcccacattcatattccgctggtagccattgatgaa
gctcattgcatttcacagtggggacatgatttcaggccgagctacagacatattgaaggc
tttttaaatagcctcggcacccgcccggttgtattggcgttgacggctaccgcaacgccc
gaggttcatgaggatatttgtacacagctcgggatcgaaaaagagaacacggtttttacc
ggtttttcacgggataatttgacgtttaaaattttaaaaggcgaaaacagggaccgtttt
atcgaatcatatgtggagaaaaaccgctcagaggcgggaattatctatacagcgacaaga
aaggaagccgaaagaatatcaagccgcctctctcaaaaaggaattgcggccgggtgctat
cacggcgggatggatgatgaagaaagagaccggcagcaggatctctttttaaatgatgag
atcagtgtaatgacagcgacctcggcgtttggaatgggcatcgataaatccaatatccgc
tatgtgattcatgcccaaattccaaaaaatatggagagctactaccaggaggcgggacga
gccggacgcgacggccttgacagcgagtgcatcctgctgttttcccctcaggacattcgg
cttcagcggtttttaatcgaacagtcgacagaagatgaagacattcgggcgcaagacgtg
aaaaaactgaggcaaatggttgatttttgccatacggaaggctgtctcgaacggtttatt
ctttcttattttggcgaagttccaaccgaagactgcggcaggtgcggcagctgtctcgac
acccgaagcatcaccgatgtgacgaaggaggcacagatggtgctgtcctgcatcatccgc
atgggagaaaggttcggaaaaaccatggtggcgcaagttctggcaggttcgaaaaataag
aaagtgaccgaaaacggcttccagcaattatcgacttacggaattttaaagaaacggtct
attgccgacataagcgattttatagagtttttaatcgcagatgagtacatcaaaatgtcc
gacggggcatatcctgttctctttgtcgccaacaaggggcgaaacgttttgctcggccgg
gaagcggtgatgcgcaaagaaaaaatgcaaacaaatcaaatcgttaaagatgacgaattg
tttgaacggttaagggcgctgcgcagaaagcttgctcaggaacaaggcgtgcctcctttt
gttgtattctctgacgaaacgctgcgggaaatgagcgggaaagtccctctgacagacgaa
gagcttttgtcagtcaaaggagtgggagaacaaaaaagagtaaaatacggagctgtattt
ctacaggagcttcaagcctataaaactgagaaagaagcataa
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