Bacillus sp. 1s-1: CJO35_13490
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Entry
CJO35_13490 CDS
T11357
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bacj Bacillus sp. 1s-1
Pathway
bacj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bacj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CJO35_13490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacj03021
]
CJO35_13490
Transcription machinery [BR:
bacj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CJO35_13490
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
HTH_20
COR
Pox_G7
DUF6961
DUF6374
Motif
Other DBs
NCBI-ProteinID:
ASV16125
LinkDB
All DBs
Position
complement(2570957..2572078)
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AA seq
373 aa
AA seq
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MADKQAHETETEFTFEQVRDQLTEAGKKRGVLTYEEIAERMSSFDIESDQMDEYYEFLGE
QGVELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVNLLSAK
EEIEYAKKIEEGDEESKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKF
DYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPT
PEEIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYEL
LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaagctcacgagaccgaaactgaattcacatttgaacaggtgagggat
caattaacagaagccggcaaaaagcgcggagtgctcacatatgaagaaattgcagagcgc
atgtccagcttcgatatcgaatcagaccaaatggatgagtattatgaatttttaggagaa
caaggcgttgaattaattagcgagaacgaagaaactgaggatcctaatattcaacagctg
gccaaggccgaggaagaatttgaccttaacgatttaagcgtgcctccgggcgttaagata
aacgaccctgtccgcatgtacctgaaagaaatcggacgggtaaaccttttgtctgcaaaa
gaagaaatcgaatacgcaaaaaaaatcgaggaaggcgacgaagagtcgaagcgccgtctc
gctgaagccaacttgagacttgtcgtcagcatcgcaaaacggtatgtcggccgcggaatg
cttttccttgaccttattcaggaaggaaacatgggcctgatgaaggcggtggaaaagttt
gactaccgcaaaggatataagttcagcacatacgcgacatggtggatcagacaggcgatt
acaagggcgattgccgaccaggcgagaacgatcaggattcctgttcatatggttgaaacc
atcaacaagctgattcgtgttcaaaggcagctccttcaggatctcggccgcgagccaacg
cctgaagagattgcggaagatatggatctgacgcctgagaaagtccgtgaaatcctaaag
atcgcccaggaaccggtttcactcgagactccgatcggtgaagaggacgattcacatctg
ggagacttcattgaggatcaggaagcgacttctccatcagatcatgcagcatatgaattg
ctgaaagaacagcttgaagatgtgctggatacattgacagaccgtgaagaaaatgtgctc
cgccttcgcttcggccttgatgatggtcgtacaagaacattggaagaagttggtaaggtg
ttcggggtaacaagagaacgaattcgtcaaatagaagctaaagcacttcgtaaattaaga
catccaagcagaagcaaacgcttgaaagattttctcgaataa
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