Bacillus sp. 1s-1: CJO35_14325
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Entry
CJO35_14325 CDS
T11357
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bacj Bacillus sp. 1s-1
Pathway
bacj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJO35_14325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacj03400
]
CJO35_14325
Enzymes [BR:
bacj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CJO35_14325
DNA repair and recombination proteins [BR:
bacj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJO35_14325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
AAA_22
UvrD-helicase
AAA_12
AAA_16
nSTAND3
UvrD_C
T2SSE
DUF4926
AAA
AAA_28
AAA_5
Rad17
NPHP3_N
TsaE
NTPase_1
AAA_18
AAA_29
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ASV16281
LinkDB
All DBs
Position
complement(2728973..2731369)
Genome browser
AA seq
798 aa
AA seq
DB search
MQRHNPDQIEMEEASFVKGTVTAVIYHNETNLYTVLKVKVEETSESFEDKTVSVTGYFPL
IHEDDIYTFYGKTASHPKFGLQFQADHFKKEVPTTKEGVIQYLASDLFEGIGKKTAEEIV
NKLGEGAINKILSDGAVLYDVPKLSKKKADKLAAALQQHQGLEQIMISLSEFGFGPQLSM
KIYQAYEAETLDKIRENPYQLVKDVEGIGFIKADELGGRMGISGKHEERIKAAILYTVEA
TCLQEGHTYIETRQLIIETQKLLNQSAGDEKVTEMDVADAIISLGEQKELFIEDERCYYP
SLYYAEQSFAKRVQKIAGQTEYDDQFPESEFLLALGELEERMKVQYAPSQKEAIQKALMS
PMLLLTGGPGTGKTTVIRGIVELYSELHGLSLNPADYKKDETFPFVLAAPTGRAAKRMSE
STGLPAVTIHRLLGWNGAEGFTHDEDNPIEGRLLIIDETSMLDIWLANQLFKAIPDRIQV
IMVGDEDQLPSVGPGQVLRDLLASNVIPSVRLTDIYRQAEGSSIVELAHEMKQGKLPENL
AAPTKDRSFIRCRQQQIKEVVEKVVKNALQKGYSARDIQVLAPMYRGAAGINELNALLQG
ILNPPKPKGREMKYGDVVYRTGDKVLQLVNQPEHNVFNGDMGEIVSIFYAKENTEKEDMA
VVSFDGNEITFAKKDFNQFTHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAIT
RSKKFLILCGEEEALEWGVKNKESSERQTSLKRRLQQAAHEEDEELMALQKELPFSVYDA
NIGMEGITPFDFMEKEAE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccataacccggaccagatcgaaatggaagaagcttcatttgtaaaaggaacg
gtaacggctgtcatatatcataatgaaacaaacctgtataccgtactgaaagtaaaagtg
gaagaaacatcagagtcttttgaagacaaaaccgtttctgtcaccggttactttcctttg
atccatgaagacgatatctacacattttacggaaaaaccgcctcccatccgaaatttggc
ctgcaatttcaagcggatcatttcaaaaaggaagtgccgacaacgaaagaaggcgtgatc
caatacttggccagcgatttatttgaaggaatcggcaagaaaacggccgaggaaattgtc
aataagctgggggaaggggcaatcaacaaaattttaagcgacggcgccgtcctgtatgat
gtcccgaagctctccaaaaaaaaggcggataagcttgccgctgcccttcagcagcatcag
gggctcgagcagattatgatctccttgagcgaattcggcttcggcccccagctgtccatg
aaaatttatcaggcgtacgaagcggaaacgctcgataaaatccgcgaaaatccgtaccag
cttgtcaaagatgttgaaggaatcggctttatcaaagcagacgaactgggcggcagaatg
gggatctcaggcaaacatgaagagcggatcaaagcggcgattttatacacggttgaagcg
acatgccttcaagaagggcatacgtacatagaaacgagacagctcatcatcgagacgcaa
aagctgttaaaccagtcagcaggcgatgaaaaagtaaccgagatggatgtggcggacgcg
atcatttccttaggggagcaaaaagagctgttcattgaagatgaaaggtgttattatccg
tccctttactacgctgaacaaagctttgccaaaagggtgcagaaaatcgccggacagacc
gaatacgatgaccagtttcccgaatcggaattcctgctcgctttaggggagcttgaagaa
cggatgaaagtgcagtacgcgccaagccaaaaagaagccatacaaaaagcgctgatgtcg
ccgatgctgcttttgacgggcggaccgggaaccgggaaaacgaccgtcatcaggggaatc
gtcgagttgtacagcgagctgcacggcttaagcttaaatccggctgattacaaaaaagat
gaaacgtttccgtttgtgctggcagcaccgaccggccgggccgctaagcggatgagcgag
tcgaccggtctgccggccgttacgattcacaggcttctcggctggaacggagccgaagga
tttacgcacgatgaagacaatccgattgaaggacggctgctcattattgatgaaacgagc
atgcttgatatatggcttgccaaccaattattcaaggcgatccccgatcggatacaggtg
atcatggtcggagatgaagaccagcttccgtccgtcggtcccggacaggtgctaagggat
ctgttggcatcgaatgtgattccttctgtcagattaaccgacatttacagacaggctgaa
ggctcttcaatcgttgaactggcgcacgaaatgaaacagggaaagcttccggaaaacttg
gccgccccgacaaaagaccgttcttttattcgctgccgccagcagcagatcaaagaagtc
gtcgaaaaagtcgtcaaaaacgcgctgcaaaaaggatattcggccagggatattcaggtt
ttggctccgatgtacagaggagcggccggcatcaatgagttgaacgcccttttgcagggc
atactgaatccgccgaagccgaaaggcagggaaatgaagtacggagatgtcgtgtaccgt
accggagataaagtgctccagctcgtcaaccagccggagcataacgtgtttaacggtgac
atgggcgagatcgtctcgattttttatgcgaaagaaaatacggaaaaagaagatatggcc
gttgtctctttcgacgggaatgaaatcacgtttgcaaaaaaagatttcaaccagtttacg
cacgcctattgctgttcgatccacaaatcgcaaggcagcgaatttccgatcgtcatcctt
ccggtcgtcaaaagctattaccggatgctgagaaggaacttgctttacacggctattaca
agaagcaaaaaattcctgattctgtgcggcgaagaggaagcccttgaatggggcgtgaaa
aataaggaatcatcagaaaggcagacatcgcttaaaagacggcttcagcaggcggcacat
gaagaggatgaagagctcatggcgcttcaaaaagagctgccattcagcgtctatgacgcc
aatatcgggatggaaggcattacaccttttgattttatggaaaaggaagcagaataa
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