Bacillus sp. BS34A: BS34A_11790
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Entry
BS34A_11790 CDS
T03833
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bacl
Bacillus sp. BS34A
Brite
KEGG Orthology (KO) [BR:
bacl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacl03400
]
BS34A_11790 (sbcC)
DNA repair and recombination proteins [BR:
bacl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BS34A_11790 (sbcC)
Archaeal homologous recombinant proteins
BS34A_11790 (sbcC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
Exotox-A_target
Motif
Other DBs
NCBI-ProteinID:
CEJ76622
LinkDB
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Position
I:1144723..1148115
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AA seq
1130 aa
AA seq
DB search
MKPIALSIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
NNTHGILNHAEDTLSVSFTFALQTNHQISYKVERVFKRTDEMKVKTALCRFIEIKDEHTV
LADKASEVNKRVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNLEQYGD
RLVKKLRRQAQEANARKNEMLAEQSGLGEASSEAVEQAEKVLEQAEARLEAMRKNRDQAK
ERFTEHQEIWNVQKEKSTYEEEEKRLAEEQPHIDSMQKRLLEAETAAALKPYADRYAEAI
QHEEQAEKEQTLAQKDLADRTAFFQQKHEEYEAWRQHKSEKEPELLAKQEQLSRLQEIEI
KLSEAKQEEERKKADLRQKEEALQSVMNELETVTDRLTRGQNRQTELKQQLKSLQVTSDE
RKSCQQAAEMALRIRQTEEQIKKEKKRSEELNLVLQKMNEEKNTLVQKTEAEENNIIQAY
EAVQTVYHLVCETERSLTRMTEEARKSQHTLHLQREKARVALLTKELAQKLTAGKPCPVC
GSTDHDPSASVHETYEADSHLEEDIKRTDVLLTEAAALSQEILSAKIMLEEQSARFIEQC
PFLQTIQAQNLEAAASFEHQPVYEAFETAKFEWKRIKQDILSVKTRMAQMIGAYQESLKK
AEQLNEKIGFEKREADRIESIISELQSSMDSSLNMFKEAFQNQSVDEAEKWQQAIEEKDR
AAEECEKRIEKSIAFLAEHEAQKEKLRESGHRLEREKLELHYAAERIKSVIADYEHELGD
YAKGDSIQIKLRSVQQDLKLLKEKEQSLYEELQSAQMKLNQAKSRASASELTLQEAKGRL
EKAKAAWLEHTKNTSITRTEEVEQSLIPADELEKMKTGIDQFMDKLKQNAANLKRVAEIL
AGRALSESEWNETVAALQEAEDAFGAAIEEKGAAAKALAVIRDHHKRFNEIEAELKKWQM
HIDRLDKLQAVFKGNTFVEFLAEEQLESVARDASARLSMLTRQRYAIEVDSEGGFVMRDD
ANGGVRRPVSSLSGGETFLTSLSLALALSAQIQLRGEYPLQFFFLDEGFGTLDQDLLDTV
VTALEKLQSDNLAVGVISHVQELRARLPKKLIVHPAEPSGRGTRVSLELM
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatcgccttaagcattaaggggctccacagctttagagaggagcagacgata
gattttgaaggcctttccggtgccggtgttttcggcattttcggcccgacaggaagcggt
aaatcctctatactcgacgcaatgacgcttgctttatacggaaaggtggaacgggcggcg
aataatacgcacggaatcttaaatcacgccgaagatacgctgtctgtgtcctttaccttt
gcgcttcagacgaatcaccaaatctcatacaaagtcgagcgtgtgtttaagagaacggat
gaaatgaaggtaaaaacggcactttgccgcttcatcgaaatcaaggacgagcatacggtg
ctggctgataaagccagcgaagtgaataaaagagtggaggagctcttagggctgacgatc
gacgattttacgagagcggtggtgctgccccaagggaaatttgctgaatttctgtcttta
aaaggggcagagcgcaggcatatgcttcagcgtttatttaatttggagcaatatggagac
aggcttgtgaaaaagctgagacggcaggcgcaggaagccaatgcgagaaaaaatgaaatg
cttgctgaacagtccggtctcggtgaggcgagctcagaggcagtggagcaggctgaaaag
gttctcgaacaagctgaagcccggctggaagcgatgaggaagaaccgtgatcaggcgaag
gagcggtttacagagcatcaggagatatggaatgtccaaaaggaaaaatccacttatgaa
gaagaggaaaaacgtctcgcagaagaacagccgcatatagacagcatgcaaaaacgcctg
ctggaagcagaaacagcagcagcccttaagccctatgcggaccggtacgcagaagcgatc
cagcatgaggagcaagctgaaaaggaacaaacgctagcccaaaaggatttagcagaccgg
acagctttctttcagcaaaaacatgaagagtatgaagcgtggcgccagcataaaagcgag
aaagagcctgagcttttagccaaacaggaacagctttcacgcttgcaggaaatcgaaatc
aaactgagtgaggccaagcaagaggaagagcgcaaaaaggctgacctccggcagaaagaa
gaggctcttcaatctgtcatgaatgaattagagaccgtaacagaccgcctgacacgaggg
caaaacagacagacagaattgaagcagcagctcaaatccctgcaggtgacatccgatgag
cgaaaaagctgccagcaggccgcagagatggcattgcgcatcagacaaaccgaggaacaa
atcaaaaaagagaaaaaacgaagtgaagaattgaacctcgtgctgcagaagatgaatgaa
gagaagaatacactcgttcaaaagacggaagcggaagaaaacaacatcattcaggcatat
gaggcagttcaaactgtgtaccatttggtgtgcgaaacggaacgctcattaacacgtatg
acggaagaggctagaaagagtcaacacacgcttcacttacagcgtgaaaaagcaagggtg
gcactgctgacaaaagagttagcccaaaagctgactgccggaaagccttgcccggtatgc
ggttcaaccgatcatgatccatctgcctcggtacatgaaacgtatgaagccgacagccat
cttgaagaggacatcaaacggacagatgtgttattgacggaagctgcagctctcagccag
gagattctttcagccaaaattatgcttgaagaacagtccgcgcgctttattgaacagtgt
ccgtttttgcagacaattcaagcacagaaccttgaagcggcagcttccttcgaacatcag
ccggtgtatgaagcatttgaaactgccaaatttgaatggaaacgaatcaagcaggacatt
ctttctgttaagacacgaatggcacaaatgattggcgcctatcaggagtctttaaaaaag
gccgagcagcttaatgaaaaaatcggttttgaaaaaagagaagccgaccgtattgaaagc
atcatcagtgagcttcaatcctcaatggacagcagtctgaacatgtttaaagaagcattt
cagaatcaatctgtggacgaagcagaaaaatggcagcaagccattgaagaaaaggaccgg
gctgcagaagaatgtgaaaaacgaattgagaagagtatcgcgtttcttgctgagcatgaa
gcacaaaaggaaaaactgcgggaatcgggacaccggcttgagcgggaaaagctggagctt
cattatgcggctgaacgcatcaagagcgtgatagctgattatgagcacgaactcggagat
tatgcaaaaggagattcgattcaaatcaaactccgctctgtccagcaggatctaaagctg
ttaaaggaaaaagaacaatctttatatgaagaactgcaaagcgcccaaatgaagctcaac
caagcgaaaagccgcgcttctgcaagcgagctcactcttcaagaggcgaagggcagattg
gaaaaagcaaaagctgcttggcttgagcatacaaaaaacacctccattacccggactgag
gaggttgaacaaagtctcatcccagctgatgaacttgaaaagatgaaaaccggcatagac
cagtttatggataaactgaagcaaaatgctgcaaacttaaaacgagtagcagagatactt
gccggcagagcattatcagagagcgaatggaacgaaaccgttgcagcattacaagaagct
gaggacgcatttggcgctgctatagaggaaaaaggcgcggccgcaaaagcactggctgtc
attcgcgaccatcataaacggtttaatgaaattgaagctgaactgaaaaaatggcagatg
catatcgacaggctggacaagctgcaagctgtgtttaaaggcaataccttcgtcgaattt
ttagctgaggagcagcttgaaagcgttgcgagggacgcctcagcaagactcagtatgctg
acaagacagcgctatgccatcgaagtagattctgagggcggcttcgtgatgcgggatgac
gcgaatggaggcgtacgacgcccggtttccagtttgtctggaggagagaccttcctcacc
tcgctttcacttgctcttgcgctgtctgcgcagattcagcttcggggggaatacccgctg
cagttctttttcttagatgaaggcttcggcacactggatcaagatctgcttgatacggtt
gtaacggccttggaaaaacttcagtcagacaacctggctgtcggtgtcatcagccatgtg
caggaactgcgtgcacggcttccgaaaaagctgatcgtccatccggctgaaccgagcggc
cgcggtacgcgggtatcacttgagttgatgtaa
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