Bacillus sp. BS34A: BS34A_18260
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Entry
BS34A_18260 CDS
T03833
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bacl
Bacillus sp. BS34A
Pathway
bacl03030
DNA replication
bacl03430
Mismatch repair
bacl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BS34A_18260 (polC)
03430 Mismatch repair
BS34A_18260 (polC)
03440 Homologous recombination
BS34A_18260 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacl03032
]
BS34A_18260 (polC)
03400 DNA repair and recombination proteins [BR:
bacl03400
]
BS34A_18260 (polC)
Enzymes [BR:
bacl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BS34A_18260 (polC)
DNA replication proteins [BR:
bacl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BS34A_18260 (polC)
DNA repair and recombination proteins [BR:
bacl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BS34A_18260 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
Zn-ribbon_8
DZR
Motif
Other DBs
NCBI-ProteinID:
CEJ77247
LinkDB
All DBs
Position
I:1727058..1731422
Genome browser
AA seq
1454 aa
AA seq
DB search
MPEVPSLMMFLGRDTVLMEQLSVNRRQFQILLQQINMTDDTFMTYFEHGEIKKLTIHKAS
KSWHFHFQFKSLLPFQIYDTLTTRLTQSFAHIAKVTSSIEVQDAEVSESIVQDYWSRCIE
ELQGISPPIISLLNQQKPKLKGNKLIVKTKTDTEAAALKNKYSSMIQAEYRQFGFPDLQL
DAEIFVSEQEVQKFREQKLAEDQERAMQALIEMEKKDKESDEDQAPSGPLVIGYQIKDNE
EIRTLDSIMDEERRITVQGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAA
LMKSLKKGMWVKARGSIQNDTFVRDLVMIANDVNEIKAKTREDSAPEGEKRVELHLHSPM
SQMDAVTGIGKLVEQAKKWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANLVDD
GVPIAYNAAHRLLEEETYVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDKFEAFANPHR
PLSATIIELTGITDDMLQDAPDVVDVIRDFREWIGDDILVAHNASFDMGFLNVAYKKLLE
VEKAKNPVIDTLELGRFLYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATAYLLLKMLK
DAAEKGIQYHDELNENMGQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVP
RIPRSQLEKYREGLLIGSACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLE
LELVRDEKALKEIIANITKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNR
HELPKVHFRTTDEMLEAFSFLGEEKAKEIVVTNTQKVASLVDDIKPIKDDLYTPKIEGAD
EEIREMSYQRARSIYGEELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLV
GSRGSVGSSLVATLTEITEVNPLPPHYVCPECQHSEFFNDGSVGSGFDLPDKTCPHCGTP
LKKDGHDIPFETFLGFKGDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAE
KTAYGYVKGYAGDNNLHMRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQ
FPADATGSEWKTTHFDFHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVM
KIFQGTESLGVTEEQIGCKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDV
WLGNAQELIHNNICELSEVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEE
MKNNNVPDWYIDSCKKIKYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFD
IDTMIKGSTAIRAVMEDINAKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSAT
EFIIDGNSLIPPFNSIPGLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHG
CLESLPDQNQLSLF
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaggtaccttcacttatgatgtttttagggagggatactgtcttaatggaacag
ttatcagtaaacagaaggcagtttcaaattcttctgcagcagattaatatgacagatgat
accttcatgacatactttgaacatggcgagattaaaaagctgacaattcacaaagcttct
aagtcttggcattttcattttcaatttaaatctttgctgccttttcaaatatatgacaca
ttaacaacgaggctgacgcaatcgtttgcccacatagcaaaagtgacatcttcaattgaa
gttcaggatgccgaggtcagtgaaagtatcgttcaagactactggtcacgctgcattgaa
gaactgcagggcatttcgccgccgattatcagtcttttaaaccagcaaaaaccgaagctg
aagggcaataaactgattgtcaaaaccaaaacagatacagaagcggctgcgctaaagaac
aaatacagttccatgattcaagcagaataccgtcaatttggctttccggatcttcagctt
gatgctgaaatatttgtatccgagcaagaagttcaaaagtttcgggagcaaaagcttgcg
gaagaccaagagcgggctatgcaggccttgattgaaatggagaagaaagataaagaaagt
gatgaagaccaagcaccatctggtcctcttgttatcggttatcaaattaaagataacgag
gaaatccgaacacttgacagcatcatggacgaagaacggagaattacggtccaaggttat
gtgtttgatgtggagacgcgcgagctgaagagcgggcgcacgctgtgtatcttcaaaatt
acagactatacaaatagtattttgatcaaaatgtttgcacgtgaaaaagaagatgcggcg
ctgatgaagtctctgaaaaaaggaatgtgggtaaaagcacgcggaagcattcaaaatgat
acatttgtcagagaccttgtcatgatcgcaaatgacgtaaacgaaataaaagcaaaaacc
cgtgaagattcagcacctgaaggagaaaaaagagtggaattgcatcttcattccccaatg
agccaaatggatgctgttacgggtatcggaaagcttgtcgaacaggcgaaaaaatggggg
catgaggccatcgctttgaccgaccatgctgtcgttcaatccttccctgatgcgtattct
gcggccaaaaagcatggaattaaaatgatttacgggatggaagcgaatctcgtggatgat
ggcgtgccaattgcttataatgccgcacatcgtctgctcgaagaagaaacatatgttgtt
tttgacgttgagacgacaggattgtctgctgtatacgataccattattgagctggctgca
gtaaaagtaaaaggcggagaaattattgataaatttgaggcgtttgcgaacccgcatcgt
ccgctttccgccacaatcatagagctgacagggatcacagatgatatgctacaagacgct
ccggatgtcgtagatgtaataagagatttcagagaatggattggcgatgatattcttgtc
gctcataatgcaagctttgatatgggattcttaaatgtagcctataaaaaacttcttgaa
gtcgaaaaagctaaaaacccagtcattgatacgcttgaacttggacgttttctctatccg
gaatttaagaaccaccggttgaacacactttgtaaaaagtttgatatcgagctcacacag
catcaccgtgcgatctatgatactgaggcaaccgcttatttgcttctgaaaatgctgaaa
gacgcagctgaaaaaggtattcagtaccatgatgagttgaatgaaaatatgggtcagtcc
aatgcttatcaaagatcaagaccgtatcatgcaacattacttgccgtgaacagcacggga
cttaaaaatttatttaagcttgtgtcactttctcatattcattatttttacagagtgccg
cgtattccgagatctcagcttgagaaatacagggaagggcttctgatcggttctgcttgt
gacaggggagaggtttttgagggaatgatgcaaaaatcgcctgaagaggtggaagatatc
gcgtcattctatgattaccttgaggttcagccgcctgaagtgtatcgtcacttgctggag
cttgaactggtccgtgatgaaaaagcgctgaaagaaattattgcgaatatcacgaagctg
ggggaaaagcttaataaaccggttgttgctacgggaaatgttcattacttgaatgatgag
gataaaatctacagaaagattttaatatcctcacaaggcggggcaaatccgctgaatagg
catgaactgccgaaagtgcatttcagaacgacagacgaaatgcttgaagctttttctttc
ttaggtgaagaaaaagcgaaggagatcgtagtcaccaatacccaaaaggttgcttcttta
gttgatgacatcaagccgattaaagatgatttatatacgccgaaaatcgaaggcgctgat
gaagagatcagagaaatgagctatcagcgtgcaagaagcatttacggggaagagctgcct
gaaattgtcgaagcgcggattgaaaaagagttaaagagtattattggccacggatttgct
gttatttacttgatctctcacaaacttgtaaaacgttcactagatgacgggtatctcgtt
ggttcccgtggttccgtaggatcttcattagttgcgacacttactgagattactgaggta
aacccgctgccgccgcactatgtttgtcctgagtgccagcattctgagttctttaatgac
ggttctgtcggttctggttttgacctgcctgacaagacatgccctcattgcggaacgcct
ttgaaaaaagacggccatgatattccatttgaaacgttcttaggatttaaaggggacaaa
gtacctgatatcgatttgaacttctcaggggaatatcagccgcaagcacacaattacaca
aaagtattgttcggagaagacaatgtatatcgtgcgggaacaataggcacggtggcagaa
aaaacagcctacggttatgtaaaaggctatgccggagacaacaatcttcatatgcgcggt
gccgaaatagatcggctcgtacagggatgcacaggtgtaaaacgtacaactggacagcac
cctggcggtattatcgtagttccggattatatggatatttatgatttttcaccgatccag
ttcccggcagatgccacaggttcagagtggaaaacgactcattttgatttccactccatc
catgacaacctgttaaaacttgatattctcggacacgatgacccgactgttattcggatg
cttcaagacttaagcggaatagatccgaaaacaattccgacggatgatcctgaagtgatg
aagatcttccagggaaccgaatcactcggtgtgactgaagaacagattggctgtaaaacg
ggcactcttggaattcctgaattcggaacccgatttgtccggcagatgcttgaagataca
aagccgaccactttttctgagctcgttcagatttcaggcttgtctcacggaactgatgta
tggcttggcaatgcacaggagctcatccacaataatatttgtgagctgagtgaggttatc
ggctgccgtgatgacattatggtttatttaatctatcaaggccttgagccgtcccttgcc
tttaaaatcatggaattcgtgcgtaaaggaaaaggattaacgcctgaatgggaagaagaa
atgaaaaataacaatgtcccagactggtatattgattcctgtaaaaagattaaatacatg
ttcccgaaagcccacgccgcggcatatgtcttaatggcagtccgcattgcttactttaaa
gtgcatcatgctcttttgtattatgcggcttattttaccgttcgtgcagatgactttgat
attgatacaatgatcaagggctctacagcaatcagagcggtaatggaggatataaacgct
aaaggacttgatgcttcaccgaaggaaaagaaccttctgactgttttagaattagcgctt
gagatgtgtgagagaggctattcattccaaaaagtcgatttatatcgctccagcgccaca
gagtttattattgacggcaacagtcttattccgccgtttaactctattccagggttaggg
acgaacgctgctttgaacattgtaaaagctcgcgaagaaggcgaattcctctcaaaagaa
gatttgcaaaagagagggaaagtatcaaaaacgattttagagtacttagatcgccatggc
tgtctggagtcactgcctgatcaaaaccaattgtcactgttctaa
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integrated database retrieval system
