Bacillus sp. BS34A: BS34A_36510
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Entry
BS34A_36510 CDS
T03833
Symbol
helD
Name
(GenBank) helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bacl
Bacillus sp. BS34A
Pathway
bacl03420
Nucleotide excision repair
bacl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bacl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BS34A_36510 (helD)
03430 Mismatch repair
BS34A_36510 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacl03400
]
BS34A_36510 (helD)
Enzymes [BR:
bacl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BS34A_36510 (helD)
DNA repair and recombination proteins [BR:
bacl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BS34A_36510 (helD)
MMR (mismatch excision repair)
Other MMR factors
BS34A_36510 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
Viral_helicase1
SLFN-g3_helicase
PhoH
AAA_16
DEAD
NACHT
NPHP3_N
nSTAND3
ResIII
Motif
Other DBs
NCBI-ProteinID:
CEJ79006
LinkDB
All DBs
Position
I:complement(3452335..3454659)
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AA seq
774 aa
AA seq
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MNQQDKEWKEEQSRIDEVLKELEKKERFLETSAGGLKHDIIGLRKSFWEDVKVNFDDAHE
AIETMASIKQQAELLSDREHNHRRMDQQLKRIHQLKKSPYFGRIDFIENGEEQAERIYIG
LASCLDEKEEHFLIYDWRAPISSLYYNYSPGKAEYEVPGETIEGEMVLKRQFMIKNGTLK
AMFNTDMTIGDEMLQEVLSHHSDTQMKNIVSTIQKEQNQIIRNEKSKILIVQGAAGSGKT
SAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPELGEENMEQATFQEYIEHR
LGRKFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAGLSFQQFINEYVTRLSSEGMIFK
NIIFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKWLLSELNKLEKKERRKDWVVHEA
ELLDKEDYLDVYKKLQERKRFSESTFNDYQREQQLLAAIIVKKAFKPLKQAVRLLAFLDV
TQLYLQLFSGWGGKFQHEKMDAIGELTRSAFTDNKLLYEDAAPFLYMQDLIEGRKKNTKI
KHLFIDEAQDYSPFQMAYMRSIFPAASMTVLGDINQSIYAHTINGDQRMDACFEDEPAEY
VRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRSGEMPLVVKTEGHESLCQKLAQEIGRLK
KKGHETIAVICKTAHQCIQAHAHMSEYTDVRLIHKENQPFQKGVCVIPVYLAKGIEFDAV
LVYDASEEHYHTEHDRRLLYTACTRAMHMLAVFYTGEASPFVTAVPPHLYQIAE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaggataaggaatggaaggaagagcagtcgagaatagatgaggtgctgaag
gagctcgaaaaaaaagagcggtttctggaaacgtctgcgggcgggttgaagcatgatatc
atcggattaagaaaaagcttttgggaggatgttaaggttaattttgatgatgcccatgaa
gcgattgaaacgatggctagcattaagcagcaggcagagctgctgtctgatcgggaacac
aatcatcggcgcatggatcagcagctcaaacgaattcatcaattgaaaaaatcgccttat
ttcggccggattgattttattgaaaacggcgaggagcaggcagagcgaatttatatcggt
ttagcttcctgtttggatgagaaggaggaacactttctgatctatgactggagggcgccg
atatcaagtttgtactacaattattccccaggaaaagcggagtacgaggtgcccggtgaa
acgatagaaggggaaatggtgctgaaacgccagtttatgatcaaaaacggcactctcaag
gcgatgtttaataccgatatgacgattggcgatgaaatgctgcaagaggtattaagccat
cactctgatacccaaatgaaaaacatcgtgtctacgattcagaaagaacaaaatcagatt
atccgtaatgaaaaaagcaagatcctgatcgtgcagggagcggctggcagcgggaaaaca
tcggctgcgcttcagcgtgtcgcttatttgttatacaggcaccgcggtgtcattgatgcc
ggacaaatcgttttgttttcacccaacttcttatttaacagctatgtctcctctgttttg
ccggagttaggagaagagaatatggagcaggcgacgtttcaggaatatatcgagcatcgt
cttggccgcaagttcaaatgtgaaagcccctttgatcagctcgaatattgcctgaccgaa
acaaagggaggcgattttccaacaaggcttgcaggaatcacatggaaggcgggtttatcc
tttcagcaattcattaatgaatacgtcacacggctttcctctgaagggatgatttttaaa
aatattatattccgcggacaaaagctgatcacaaaggagcaaattcaatcctatttttac
tcattggatcaaaatcactccattccgaatcggatggagcaaaccgcgaagtggctgctg
agtgagcttaacaagcttgagaaaaaggaacggcgaaaggattgggttgttcatgaagct
gagctgcttgacaaagaggactacttggacgtgtacaaaaaactgcaggaaaggaaacgg
ttcagcgagagtacgtttaacgattatcaaagagagcagcagctgcttgccgccatcatt
gtgaaaaaagctttcaaaccgctcaaacaggcagtcaggctccttgcatttcttgatgtt
acacaactttatttgcaattgttttctggctggggaggaaaatttcaacatgagaagatg
gatgcgataggtgagctgacccgttcggcatttacggataataaattgctctatgaggac
gcggcaccgtttctttatatgcaggatctgattgagggcagaaagaaaaatacgaaaatc
aaacatctatttattgacgaagcccaggactattcaccgtttcagatggcttacatgaga
agcatttttccggctgccagcatgacagtgctcggtgatatcaatcagtccatctacgcg
cataccataaacggggatcagcgtatggatgcgtgctttgaggatgagcctgctgagtat
gttcgtttaaagagaacatacagatcaacaaggcagattgtcgagtttaccaaagcgatg
cttcaagatggagcggatattgagccgtttaatagaagcggggaaatgccgctcgttgtc
aaaactgaaggacatgagagcctttgccaaaagctcgcgcaagaaattggccggctcaag
aaaaaagggcacgaaacaatagccgtcatctgcaagactgcgcatcaatgcatacaggcg
cacgcccacatgagtgaatatacagatgttcgcctgattcataaagaaaatcaaccattt
caaaagggtgtttgcgtgattccggtgtatttagcgaagggaattgaatttgacgcagtg
cttgtctatgatgcatctgaagaacactatcatacagagcacgaccgcaggcttttatat
actgcgtgcacccgtgcgatgcacatgctggcggtattttatacaggtgaagccagtccg
tttgtaaccgctgtgccgcctcacttatatcagattgctgaatga
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