Bacillus sp. N1-1: GNK04_00160
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Entry
GNK04_00160 CDS
T11443
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bacn Bacillus sp. N1-1
Pathway
bacn03030
DNA replication
bacn03430
Mismatch repair
bacn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GNK04_00160 (dnaX)
03430 Mismatch repair
GNK04_00160 (dnaX)
03440 Homologous recombination
GNK04_00160 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacn03032
]
GNK04_00160 (dnaX)
03400 DNA repair and recombination proteins [BR:
bacn03400
]
GNK04_00160 (dnaX)
Enzymes [BR:
bacn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GNK04_00160 (dnaX)
DNA replication proteins [BR:
bacn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GNK04_00160 (dnaX)
DNA repair and recombination proteins [BR:
bacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GNK04_00160 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
DnaX_C
PIF1
AAA_22
TIP49
AAA_5
AAA_assoc_2
AAA_19
Rad17
Mg_chelatase
AAA_16
Sigma54_activat
AAA_7
AAA_2
AAA_14
RCF1-5-like_lid
DUF815
TsaE
EAD1
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QHA90025
LinkDB
All DBs
Position
34899..36590
Genome browser
AA seq
563 aa
AA seq
DB search
MSYQALYRVWRPQTFEDVVGQKHVTRTIQNALMQQKISHAYLFTGPRGTGKTSAAKIIAK
AINCEKAPVAEPCNECSACLGITDGSISDVIEIDAASNTGVDDIRDIRDKVKYAPSSVSY
KVYIIDEVHMLSTGAFNALLKTLEEPPKHVVFILATTEPHKIPLTIISRCQRFDMRRITA
QDIVGRLQTIIHAQDIEVEEDALYQVARAADGGMRDALSILDQAISYSEAEVVLDDVLAV
TGSVSQKMISKIALAFHHKDVAEALNAVEELMDHGKDAARFLEDLIYYYRDLLLYQTAPQ
LEEVVERVKIDETFQQLGDQSAKDWIYKVIETLNRSQQEMKWTNHPRIFLELALVQICQD
ETSSQSQPAQDQSELLERIQKLEGELKTLKEQGVTVKQEETSEPKQKKQFKPSRQKSGVS
HGRIKEMLKKATKQDLMKVKSVWGEVMENVRQEKVSAHAWLKDSEPVAATDNSFLLSFQY
DMHCQMATKDNIRGTLEQVLSRTIGKQLEMVAIVETEWKEIRAEFLKTRDEPEPDENGGK
PAEDPLIAEARRLVGDDLLDIQT
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagcgctataccgcgtttggcgaccgcaaacgtttgaagatgtggttggt
caaaagcatgttacaagaacaattcagaacgcactcatgcagcaaaaaatctctcacgcc
tatttgtttacaggacctcgaggaacgggaaaaacgagtgctgccaaaattattgcgaag
gcgattaactgtgagaaggcaccagtggctgaaccgtgcaatgaatgttcagcgtgtcta
ggcatcactgatggatcaatttctgacgtcatagaaattgatgcggcttctaatacgggg
gtcgacgacattcgtgatattcgcgataaagtgaagtatgcaccaagttctgtttcttat
aaggtgtatatcatagatgaagttcacatgctttctacaggagcgttcaatgctcttctt
aaaacattagaagaacctccaaagcatgtggtgtttatccttgcaacgacggagcctcac
aaaatcccattaacaatcatttcaaggtgtcagcgttttgatatgagaaggataacagcg
caggacattgtgggacggttacaaaccattattcatgcgcaggatattgaggtagaagaa
gatgctctttatcaagtcgctcgagcggcagatggcggaatgcgagatgctttaagtatt
cttgatcaggcaatctcatatagtgaggcggaagttgtattagatgatgtgcttgctgta
acaggaagcgtgtctcaaaaaatgatttcaaaaatcgcattggctttccatcataaagat
gtggcggaagcactgaatgcagtggaagaattaatggatcacgggaaagatgctgcacgt
ttccttgaagatctgatctattactatcgtgatttattactttatcaaacggcccctcag
cttgaagaggttgttgaacgagtgaaaattgatgaaacgttccagcagttaggtgaccaa
tcagcgaaagactggatctacaaggtcatcgagacgttgaatcgtagtcagcaagagatg
aagtggacaaaccatccgcggattttccttgaattagctctcgttcaaatttgtcaggat
gaaaccagtagtcagagtcagcctgctcaagatcagagcgaattacttgaacgtattcaa
aagcttgagggtgaactgaagacactgaaagagcaaggtgttacggttaaacaagaagag
acaagtgaaccgaaacagaagaaacaatttaaaccttccagacagaaatctggtgtatct
catggtagaataaaagagatgcttaagaaagcgaccaagcaggatttaatgaaagtaaaa
agtgtttggggcgaagtgatggagaacgtccgtcaggaaaaagtctctgctcacgcctgg
ttaaaggatagtgagccggttgcagctacagataactccttcttgctatctttccagtac
gatatgcactgccagatggcaacgaaagacaacattcgtggtacgcttgaacaagtactt
tcacgtacgattggcaaacagcttgaaatggttgcaatagtcgaaacagagtggaaggaa
atccgcgctgagttcttgaagacaagagatgaaccagaacccgacgaaaatggtgggaag
ccagcagaagatccattaattgctgaagcaagacgccttgtaggcgatgatttattagat
attcaaacttaa
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