Bacillus sp. N1-1: GNK04_15420
Help
Entry
GNK04_15420 CDS
T11443
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bacn Bacillus sp. N1-1
Pathway
bacn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GNK04_15420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacn03400
]
GNK04_15420
Enzymes [BR:
bacn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GNK04_15420
DNA repair and recombination proteins [BR:
bacn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GNK04_15420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
AAA_22
nSTAND3
NPHP3_N
AAA
AAA_16
AAA_28
T2SSE
DEAD
NTPase_1
AAA_18
DUF4926
TsaE
AAA_17
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QHA92708
LinkDB
All DBs
Position
complement(2945464..2947734)
Genome browser
AA seq
756 aa
AA seq
DB search
MDQPQKGYIKGRPIQMIFFNEDSLYGVARLRISETNEAYDEKEVVVNGMIPRLLEDETYV
FYGRFTDHPRYGKQYAVESFERQMPESKPGLIQYLSSDLFHGIGEKTAESIVDALGERAI
AKIMRDPSILSKVPKLSEEKAKGLYDSLMEHQGLDQIMIRLTELGFGPRLSMKIFKAYKQ
ETLEIVEKNPYQLIQDVEGIGFRRADDLGKSIGIEGKHPDRIRAACLHTLNEQTLQEGHV
YLEYNALIRSVNELLGDRLDEADISRELISLYESDKLILDRERIYLHSLYYAEKGLVTGL
NNVMSQTEYADSFPESEFYRALGDLEERLGIQYAPSQREAVQKAISSPFMILTGGPGTGK
TTVIKGIVELYAELNGLSLDPKDYTKENPFPVLLVAPTGRAAKRMSEATGLPAFTIHRLL
GWKGEAGFEHDENNPIEGKLLIVDEVSMVDVWLANQLFKSLPSQIQVIVVGDEDQLPSVG
PGQVLKDMIDSHAVPVSRLTDIYRQAEGSSIIDLAHSIKEGELPEEFHKPTPDRRFFPCS
QSQIIEVVSQVCGNALKKGYSPRDIQVLAPMYRGSAGVDRLNQELQKLFNPPTDQRRELF
HGDLVYRVGDKVLQLVNNPEDNVFNGDMGEVVSVFFAKENIEKQDQLVVSFDGQEVVYDR
PDFNQLTHAYCCSIHKSQGSEFPIVVLPIVRGYYRMLRKNLLYTAVTRSKDYLILCGEED
AIKLAIKTEDDQIRNTQLTEKLQEMIGEQTTIEESI
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggatcagccacaaaaaggctatatcaaaggaagaccgatacaaatgattttcttcaat
gaagatagtttgtatggggtggcaagactacgaatatcagaaacgaatgaagcctacgat
gagaaagaagtcgttgtaaatggaatgattccaaggcttttggaagatgaaacgtacgtt
ttctatggacggtttacagaccatccacgctacggaaaacagtatgctgttgaatcattt
gagcgacagatgcctgaatcaaaaccggggcttattcaatacttatcaagtgatttattc
catggaattggtgaaaagacagcggaatcgattgttgatgcgctaggagagcgcgcaatt
gctaagattatgcgtgatccttcaatattaagtaaggtaccaaagctatctgaagaaaaa
gcaaaaggattatatgattctctcatggagcatcaggggcttgaccaaattatgattcga
ttaactgaattagggtttggaccgagactatcgatgaaaatttttaaagcctataagcaa
gaaacactcgaaattgttgagaaaaatccttatcagcttattcaagacgtggaaggcatt
ggttttcgtcgagcggacgatttagggaaatcgattggtattgagggaaagcatcccgat
cgcattagggcggcatgtcttcatacgttaaatgaacaaacgttacaggaagggcatgtg
tatttagagtacaatgctttgattcgatctgtaaatgagctgctaggtgatcgactcgat
gaagcagatatttcaagggaactgatctcgctttacgagagtgataagttaattcttgat
cgagagagaatctatttacattcactttactatgctgaaaaaggtcttgtcactggattg
aataatgtgatgtcgcaaacagagtatgctgattcttttcctgaatctgaattttatcgc
gcacttggagatctcgaagaacgactcggcattcaatatgcgccatcacagcgtgaagcg
gtacaaaaagcgatatcgtctccgttcatgattttaactggcggacctggtacgggcaaa
acaaccgttataaaagggattgttgagctttatgctgaattaaatggcctttctttagat
ccaaaagattacacaaaagaaaatccctttcccgttctgctcgtcgcaccaacaggaaga
gcagccaaacgaatgagtgaagcaaccggattaccggctttcacgatacatagattactt
ggctggaaaggtgaggcgggatttgaacatgatgagaataatccaattgaaggtaaatta
ttaattgttgacgaagtatctatggttgacgtgtggctagccaatcaattatttaaatcc
ttaccatctcaaattcaagtgattgttgttggtgatgaagatcaacttccttcagtagga
ccaggacaggtgcttaaggatatgattgattcacatgctgttcccgttagtagactgacg
gacatttaccggcaggctgaaggctcttcgattattgatcttgcccactccattaaagaa
ggagagcttccagaagagtttcataaaccgacgcctgatcgaaggttctttccttgttct
caatctcagattattgaggttgtttcgcaagtttgtggcaatgcattaaagaagggatac
tctcctcgagatattcaagttcttgctccgatgtatcgaggatcagctggagtggatcga
ctaaatcaggagcttcaaaagctatttaatcctccaactgatcagcgaagagagcttttt
catggagatctcgtgtatcgagtcggagataaagttcttcaacttgtaaacaatcctgaa
gacaatgttttcaatggcgatatgggcgaggtggtttctgtattctttgcgaaagaaaat
attgaaaagcaggatcaacttgttgtttcttttgatggacaggaagtggtttatgacagg
cctgactttaatcaattaacacatgcctactgctgctctatccataaatcccagggtagt
gagtttccaattgtggttcttcctattgtaagaggatattatcggatgctgcggaagaac
cttctttatacagccgttacaagaagcaaagattatttgattttgtgcggcgaagaagat
gcgattaagcttgctataaaaacagaagatgatcagattcgaaatacgcagttaacagag
aaattgcaagaaatgattggcgaacaaacaacaattgaagaatcaatctaa
DBGET
integrated database retrieval system
