Bacillus sp. OxB-1: OXB_0330
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Entry
OXB_0330 CDS
T03635
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
baco
Bacillus sp. OxB-1
Pathway
baco03420
Nucleotide excision repair
baco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
baco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OXB_0330
03430 Mismatch repair
OXB_0330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baco03400
]
OXB_0330
Enzymes [BR:
baco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OXB_0330
DNA repair and recombination proteins [BR:
baco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OXB_0330
MMR (mismatch excision repair)
Other MMR factors
OXB_0330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAQ08802
LinkDB
All DBs
Position
complement(330279..332516)
Genome browser
AA seq
745 aa
AA seq
DB search
MNTISENLLAGMNPEQARAVKKTEGPLLIMAGAGSGKTRVLTHRIAYLVVEKNIYPSNIL
AITFTNKAAREMRERIDGLLGHGTGERMWVSTFHSMCVRILRRDIDRIGISKNFTILDTA
DQLTVIKSVLKELNLDPKQYDPRSMLNAISSAKNECIDAHEYRGQINSFNPFEKAAADVY
DGYAKRLRQNQSLDFDDLIMLTLTLFEKVPDVLEFYQNKFQYIHVDEYQDTNNAQYRLVQ
MLASKFKNICVVGDSDQSIYRWRGADIGNILSFEKDYQNAEIILLEQNYRSTKRILDAAN
DVITNNRSRYDKKLRTENEEGEPIYIYKASDEKDESQFVVGKILELKEQENLKLDQFAIL
YRTNAQSRVIEEFLVKSNLDYTIVGGTKFYDRKEIKDLLAYLRLIANNADDLALARIINE
PKRSIGATSFDRMARYAIERDTPIFDALKEVDFMGLTPRAANEVAKFHELIEGFTQMQEY
LTVTELVEQVLEKTGYRAMLQNDKTIESESRLENIEEFLSVTEAFEKRAEEDNGDRSLIA
FLTDLALIADIDSLDKEENQSSEKIVLMTMHAAKGLEFPVVFIIGMEENVFPHSRSIGDD
EEMEEERRLAYVGITRAEQKLFLTSASFRMLFGRSSYNSPSRFIGEISDEIIEVIPGEDD
FGFGSRSSVRPSAPMRPAVKKPIYQSSGGEKLGWRPGDKAVHKKWGTGMVVSVKGTGEEV
ELDIAFPDPVGIKRLLAKFAPIEKA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaatttcagaaaacctgctcgccggcatgaatccggagcaagcacgggctgtg
aagaaaacggaagggcctctcctcatcatggcgggggccggttccggcaaaacccgtgtg
ctgacgcatcggatcgcctatttagtcgtggagaaaaacatttacccttccaacatatta
gcgatcacgttcaccaataaagccgctcgggaaatgcgcgagcggattgatgggctcttg
ggccacgggacgggcgaacggatgtgggtttctaccttccactcgatgtgcgtccggatt
ttacgccgggacatcgatcggatcggcatttcaaagaatttcacgattctcgacaccgcc
gatcagttgacggtcattaaaagcgtcctgaaagaattgaacctcgatccgaagcaatac
gatccccgttccatgctgaatgccatcagttccgcaaaaaatgaatgtatcgatgcgcac
gaataccgcgggcagatcaattcattcaacccgttcgaaaaggcggcggcggatgtctat
gacggctatgcgaagcgactgcgccaaaaccaatcgctcgatttcgatgacctcatcatg
ttgaccttgaccctatttgaaaaagttcccgatgtccttgagttttatcaaaataaattc
caatatatccacgtggatgagtatcaggatacgaacaatgcgcaataccgcctcgtccag
atgctggcaagcaaattcaagaacatttgcgtcgtaggcgattctgaccaatcgatctac
agatggcggggggccgatatcggcaatatcctgtcctttgaaaaggattaccaaaacgct
gaaatcatccttttggaacagaactaccgatcgacgaaacggattttggatgcggcgaat
gatgtcattacgaataatcgcagccgctatgataaaaagctaaggactgaaaacgaagaa
ggcgagccgatctatatctacaaggcaagcgatgaaaaggatgaatcccagtttgtcgta
ggaaagatcttggaattgaaggaacaggaaaacctgaaactcgaccaattcgccatcctc
tatcgcacaaatgcgcaatcacgggttattgaggagttcttggtgaagtcgaatctcgat
tatacgattgtcggaggcacgaaattctacgatcggaaagaaatcaaggacttgctggcg
tacttgcgtttgatcgccaataatgcggatgatttggcgctcgcccggatcattaatgaa
ccgaagcgcagcatcggcgccacgtcatttgaccggatggcaagatatgcaattgagcgg
gacaccccgatttttgatgcgttgaaagaagtcgatttcatgggtttgacaccgcgtgca
gccaatgaggttgcgaagttccatgaactcatcgaaggattcacccagatgcaggaatat
ttgacggtgacggaactggttgagcaagtgttggaaaaaacgggatatcgggcgatgctg
caaaatgataagacaatcgaatcggaaagtcgcttggaaaacatcgaagaattcctgtcc
gtcacggaggctttcgaaaaacgggcggaagaggataacggagaccgatcgctcatcgca
ttcctcaccgatctcgctctcattgcggatatcgattctttggataaagaagagaaccaa
tcgtcggagaaaatcgtcttgatgacgatgcacgcagcaaaaggattggaatttccggtc
gtcttcatcatcggcatggaagagaacgtctttccgcattcccgttccatcggggatgat
gaggaaatggaagaagagcgccgattggcgtacgtcggaattacgcgtgcggaacagaag
ctgttcttgacatctgcttctttccggatgctgttcggacggtcgagctataatagccca
tcccgtttcatcggcgaaatatcggatgaaataatcgaggtgatcccgggagaagacgac
ttcggtttcggatcgcgttcttccgtacgcccgtctgcaccgatgcgcccagcggtcaaa
aaacctatatatcagtccagcggcggcgagaagctcggatggagacccggagataaggcg
gtccataaaaaatggggcaccggtatggtcgtcagtgtgaaagggacgggtgaagaagtc
gaactcgacatcgccttcccggatccggtcggtattaaacggttgcttgcaaaatttgca
ccgatcgaaaaagcgtaa
DBGET
integrated database retrieval system
