Bacillus sp. OxB-1: OXB_0683
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Entry
OXB_0683 CDS
T03635
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
baco
Bacillus sp. OxB-1
Pathway
baco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
baco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OXB_0683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baco03021
]
OXB_0683
03400 DNA repair and recombination proteins [BR:
baco03400
]
OXB_0683
Enzymes [BR:
baco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OXB_0683
Transcription machinery [BR:
baco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OXB_0683
DNA repair and recombination proteins [BR:
baco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OXB_0683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SpoIVA_ATPase
DUF961
Motif
Other DBs
NCBI-ProteinID:
BAQ09155
UniProt:
A0A0A8JEU7
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All DBs
Position
complement(690089..691033)
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVMISEDAKFGKFVIEPLERGYGNTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVMEDVATIILNVKKLALKIYSDEEKVIEIDVKGEGTVTAADITHDSDVEV
LNPELHIATLGKNGHLRMRMYAIRGRGYAPSDQNKREDLAIGVIPIDSIYTPVSRVNFQV
ENTRVGQMTNFDKLTLDIWTDGSIGPKEAVSLGAKILTEHLNIFVGMTDEAQTAEIMVEK
EENQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKTEDEMMKVRNLGRKSLEEVK
AKLDELNLELRTED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgagaaaccgaagattgaaacagttatgatcagtgaagatgccaagttc
ggtaaattcgttatcgaaccgttggagcgtgggtacggaaacacgttaggaaactccttg
cgccgcatccttctttcctcattaccaggggctgccgtaacgtctattcaaatcgatggg
gtccttcacgaattctcgacaattgaaggtgtcatggaagacgttgccaccatcattttg
aatgtgaagaaactggctctcaaaatctattcggacgaagagaaagtgattgaaatagat
gttaaaggggaagggacggtcactgctgccgacattacgcatgatagtgatgtggaagta
ttgaatccggaacttcatattgcgaccctcggtaaaaacggacatctgcgcatgcggatg
tatgccatccgtgggagaggctatgcaccttccgatcagaacaaacgtgaggatcttgcg
attggtgttattccgatcgactctatttacactccagtttcacgcgtcaacttccaggtg
gaaaacactcgtgtcggtcaaatgacaaacttcgataagttgacacttgatatatggaca
gatggcagcatcggtccaaaagaagcggtttcgctcggggcaaagatcctgacagagcat
ttgaatatttttgtcggcatgacagatgaagcacaaactgctgaaatcatggtggaaaaa
gaagaaaaccagaaagagaaggtccttgagatgacgatcgaggaattggatctttccgtg
cgttcttataactgcctgaagcgtgcaggtatcaataccgtcctcgaacttgccaacaag
accgaagacgaaatgatgaaagtgcgcaatcttggccgcaaatcactagaagaagtcaaa
gcaaaactagacgagctgaatcttgagttgcgtactgaagattga
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