Bacillus sp. OxB-1: OXB_2032
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Entry
OXB_2032 CDS
T03635
Name
(GenBank) DNA topoisomerase i
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
baco
Bacillus sp. OxB-1
Brite
KEGG Orthology (KO) [BR:
baco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baco03032
]
OXB_2032
03400 DNA repair and recombination proteins [BR:
baco03400
]
OXB_2032
Enzymes [BR:
baco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OXB_2032
DNA replication proteins [BR:
baco03032
]
Prokaryotic type
DNA Topoisomerases
OXB_2032
DNA repair and recombination proteins [BR:
baco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OXB_2032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
DUF2996
JHBP
Auto_anti-p27
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
BAQ10503
UniProt:
A0A0A8JIB9
LinkDB
All DBs
Position
2111698..2113773
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVRASLGHLRDLPRSQMGIDTENNYEPKYITIRGK
GPILQELKKDAKKAKKIFLAADPDREGEAIAWHLAHQLGVDTKSDCRVVFNEITKDAIKE
SFKNPRPIDMDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVALRLIIDREN
EIKNFVPEEYWSITGLFEKNKKEFEATFYGDSKKKVKLTNKEQVDEILESLEGDSFTIQN
VVKKERKRNPALPFTTSSLQQEAARKLNFRARKTMMLAQQLYEGINLGKEGNVGLITYMR
TDSTRISDTAKTEVKSFIENTYGNEYVSKSAPAAKKESGNTQDAHEAVRPTSALRTPSEL
KEVLSRDQLRLYKLIWERFVASQMAPAVLDTVSVDLVNGDVRFRANGSQVKFQGFMKVYV
EGDDDQTEEKDRILPPLEEGEQIKHNKIDPKQHFTQPPPRYSEARLVKTLEELGIGRPST
YAPTLDTIQKRGYVTLDAKRFVPTELGEIVHQAMNEYFRDIIDVEFTAQMEKGLDNVEEG
NVKWVQVIDDFYRDFEKHVQVADAEMEKIEIKDEPAGEDCEKCGSPMVYKLGRYGKFMAC
SNFPDCRNTKTIMKPIGVTCPTCKEGQVVERKGKTKRVFYGCDRYPDCDYVSWDKPIARP
CPKCESTLIEKRLKKGVQIQCTKCDYKEDEQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagactacttagtgattgtggaatcgccggcaaaagcgaaaacgatcgagcgttat
ctcgggaaaaaatataaagtgcgggcatcgctcgggcacttgcgcgacctcccacgcagt
caaatgggaatcgatacggaaaataattatgaaccaaaatatattacaatccgcgggaag
ggacctatcctgcaagaattaaaaaaagatgcgaaaaaagcgaagaaaatctttctcgca
gctgaccccgacagggaaggggaagcaatcgcatggcatttagctcatcagcttggcgtc
gataccaagtcggattgcagggtcgtattcaatgaaattacgaaagatgccatcaaggaa
tctttcaaaaacccgcggccgatcgatatggacttggtggatgcccaacaggcacgtaga
atattggaccggctcgtcggatataacatcagcccgatactatggaagaaagtgaagaag
ggattgtctgcgggaagagtccaatccgtagcgctccgcttgatcatcgaccgggaaaat
gaaatcaagaactttgtcccggaagaatactggagcatcaccggtttgtttgaaaagaac
aagaaagagttcgaagcgacgttttatggggattccaagaaaaaagtgaagctgacgaac
aaagaacaagtcgatgagattttggaaagcctcgagggagattcgttcacgattcaaaat
gtcgtcaagaaagaacggaagcggaaccctgcactaccgttcacgacctcttccctgcag
caggaagccgcaaggaaattgaatttccgggcgaggaagacaatgatgcttgcccagcag
ctttacgaggggatcaatctcggcaaagaggggaatgtcggtttgatcacgtacatgcgt
accgattcaacccggatttccgatacggcgaaaacagaagtgaaatccttcattgagaat
acgtatggcaatgaatatgtttcaaaatcagctcctgctgccaaaaaagagtcaggaaac
acgcaggacgcccacgaagcggtccggccgacatccgccttgcgaacaccatcggaattg
aaggaagtgctctcacgggaccaattgcggctttacaagctgatctgggagcggttcgtt
gcgagtcagatggctcccgcggttctggatacggtatccgtcgacttggtcaatggggat
gtccgattccgtgcgaacggctcacaagtgaagttccaaggtttcatgaaagtgtatgtg
gaaggcgatgacgatcagacggaagagaaggatcggatccttcctcctttggaagaaggg
gaacagatcaagcataataagatcgatccgaagcagcatttcacacagccgcctccgcga
tattccgaggcgcgcctcgtcaagacattggaagaactcggaatcggccgtccttccaca
tatgcaccaactttggatacgattcagaaacggggttatgtcacattggatgccaagcga
tttgtcccgactgagcttggcgaaatcgtccatcaagcgatgaatgaatactttcgtgat
ataatagatgtcgagtttacagcgcaaatggaaaaagggctcgacaatgtcgaggaaggc
aacgtcaaatgggtgcaagtcatcgatgacttctaccgggattttgaaaagcatgtgcaa
gttgcagatgctgaaatggaaaaaatcgaaatcaaagacgagccggctggcgaagattgt
gagaaatgcggctcaccgatggtatacaaattgggccgttacggtaagttcatggcctgc
tccaatttccctgattgccggaatacaaagacgatcatgaaaccgatcggtgtcacttgt
ccaacttgtaaggaagggcaggtcgtggagcggaaggggaaaacgaagcgcgtcttttat
gggtgtgaccggtatccggactgcgactatgtatcgtgggataagccgattgcccgtcct
tgcccgaaatgcgaaagcacacttattgaaaagcggttgaaaaaaggtgttcagattcaa
tgtacgaagtgtgattataaggaagatgaacagtaa
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