Bacillus sp. OxB-1: OXB_2129
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Entry
OXB_2129 CDS
T03635
Name
(GenBank) RNA-binding protein hfq
KO
K03666
host factor-I protein
Organism
baco
Bacillus sp. OxB-1
Pathway
baco02024
Quorum sensing
baco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OXB_2129
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OXB_2129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baco03019
]
OXB_2129
03036 Chromosome and associated proteins [BR:
baco03036
]
OXB_2129
Messenger RNA biogenesis [BR:
baco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OXB_2129
Chromosome and associated proteins [BR:
baco03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
OXB_2129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
BAQ10600
LinkDB
All DBs
Position
2215220..2215444
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AA seq
74 aa
AA seq
DB search
MAQGNMQDVFLNSLRKNNTFVTVFLLNGFQLKGLIKSYDNYTVLLESDGKQQLIYKHAIS
TYVPSKPVVLKEDE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagggaatatgcaggatgtttttttaaattcgttacggaaaaacaatacattt
gtaacggtattcttactgaatggatttcaattgaagggcctaatcaagtcatatgataat
tacacggtcctgcttgaatcggacggaaaacagcaattgatctacaaacatgcgatttct
acatacgtcccatccaaaccggtcgtattgaaagaagatgaataa
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