Bacillus sp. OxB-1: OXB_2917
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Entry
OXB_2917 CDS
T03635
Name
(GenBank) ATP-dependent RNA helicase yqfr
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
baco
Bacillus sp. OxB-1
Brite
KEGG Orthology (KO) [BR:
baco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baco03019
]
OXB_2917
03009 Ribosome biogenesis [BR:
baco03009
]
OXB_2917
Enzymes [BR:
baco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OXB_2917
Messenger RNA biogenesis [BR:
baco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OXB_2917
Ribosome biogenesis [BR:
baco03009
]
Prokaryotic type
rRNA helicases
OXB_2917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_30
Flavi_DEAD
AAA_22
DUF7117
CMS1
Motif
Other DBs
NCBI-ProteinID:
BAQ11388
UniProt:
A0A0A8JKX0
LinkDB
All DBs
Position
complement(2937847..2939151)
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AA seq
434 aa
AA seq
DB search
MSKFTDYQFKPFIREAIAKLGFNNPTPIQKEMIPLILKGTSAIGQAHTGTGKSHSFLIPV
LQRTDADSEEVQAVITAPTRELASQLYDELLKMTEGTEVRASLLIGGTDKQRSIGKLKSN
PQIVVGTPGRIRDMAENGALAIHTASILVIDEADLAFDMGFIEDIDQFASKMQADLEMYV
FSATIPEKLKPFLMKYMESPVHVKIGERKPLTEGMRYSLVPVRSLGKRKKLLEVMEAINP
YLAIIFANTRQNADELADYLAEHGVKAGRIHGDLTPRERTRMMKQVRDLEFQYIVATDLA
ARGIDIPGVSHVINFELPDDLEFFIHRVGRTARAGNEGTAITLYEPSEDDKVVRIEKMGI
PFVHEDVKNGEWIEVKERHARKKRVKQEDELDRKASALVKKPAKVKPGYKKKMTQQMEQI
KKRERRLSRKNGKR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtttacagattatcaattcaaaccatttatcagggaagccatcgcgaaactc
ggtttcaacaatccaacaccgatccaaaaagagatgatcccgttgatattgaaaggtaca
agcgccatcggacaagcgcacacaggaacgggaaagtcgcatagtttccttattcccgtg
ttacagcggaccgatgcagattccgaagaagtgcaagcggtcatcacggcacctacgcgc
gagctggcgtcgcaattatacgatgagctgttgaagatgacggaaggcacagaggtccgg
gcgtctttattgatcggcggaacggataagcaacggtccatcgggaagttgaaatcgaat
ccgcaaatcgtcgtcggcacgcccggacggatccgggatatggccgaaaatggggcgctg
gccatccacacggcctccatcttggtcattgacgaagcggatcttgcattcgatatggga
ttcattgaggatattgaccagtttgcttccaaaatgcaggccgatttggaaatgtacgtc
ttctccgcaacaattccggaaaagttgaagccgtttttgatgaaatatatggagtcgccg
gtccatgtgaaaatcggggaacgcaagcctttgacggaagggatgcgctattctctcgtt
cctgtacgaagtctcggcaagcggaagaaattgctggaagtaatggaggccatcaatccg
tatttggccatcattttcgccaacacgcgtcagaatgccgatgaactcgctgattatctt
gcggaacatggcgtgaaagccggccggattcatggggatttaacgccgcgtgaacggacg
cgcatgatgaaacaagtccgcgatctggagttccagtatattgtcgcgaccgatcttgcg
gctcgtggcatcgatattccaggagtcagccacgtcatcaattttgaattgccggatgac
cttgagttcttcattcaccgggtaggacgtacagctcgtgcaggcaatgaagggacggcg
atcaccttatacgaaccatcggaagacgataaagtcgtccgcatcgaaaagatgggaatc
ccgttcgtccatgaagatgtgaaaaatggagaatggattgaagtcaaagaacggcacgcg
cggaagaaaagggtgaagcaggaggatgagttggaccggaaagcgtccgccctcgtgaaa
aaaccggcaaaagtcaagccgggctataaaaagaaaatgacccaacagatggaacaaatc
aaaaagagggaaaggagattgtctagaaaaaatggcaaacgataa
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