Bacillus sp. OxB-1: OXB_3088
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Entry
OXB_3088 CDS
T03635
Name
(GenBank) Holliday junction DNA helicase ruvb
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
baco
Bacillus sp. OxB-1
Pathway
baco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OXB_3088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baco03400
]
OXB_3088
Enzymes [BR:
baco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OXB_3088
DNA repair and recombination proteins [BR:
baco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OXB_3088
RecFOR pathway proteins
OXB_3088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
nSTAND3
RNA_helicase
AAA_22
TsaE
NB-ARC
Sigma54_activ_2
AAA_3
AAA_14
DUF815
bpMoxR
AAA_25
AAA_18
NTPase_1
MCM
AAA_24
Bac_DnaA
AAA_17
AAA_28
Rad17
ABC_tran
NACHT
Resolvase
Parvo_NS1
IstB_IS21
NPHP3_N
AAA_33
MMR_HSR1
AAA_19
RsgA_GTPase
ATPase_2
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
BAQ11558
UniProt:
A0A0A8JLA7
LinkDB
All DBs
Position
complement(3084226..3085236)
Genome browser
AA seq
336 aa
AA seq
DB search
MEDRVLSAEVTNFDEHFEQSLRPQFLNQYIGQDKVKDNLGIFIEAAKGRQESLDHVLLYG
PPGLGKTTLANVIANEMGVNVRMTSGPAIERPGDLAAVVSSLEPGDVLFIDEIHRLNRSI
EEVLYPAMEDFCLDIIVGKGPAARSIRLDLPPFTLIGATTRAGSLSAPLRDRFGVPLRLE
YYDVDPLKEIVIRSAHLFEVEIDGQAAMEIARRSRGTPRIANRLLRRVRDYAQVRGTGAV
TLEMSKEALEMLQVDSHGLDHIDHKLLTGMIERFRGGPVGIDTIAASIGEESVTIEDVYE
PYLLQIGFIQRTPRGRVATPLAYEHFGYPIHDQDGN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcgggtgctatcggcagaggtgacaaatttcgatgaacactttgaacaatct
ttgagacctcaattcctgaaccagtatattgggcaggataaggtgaaggacaatctcggc
atcttcatcgaagcggcgaaggggcggcaggaaagtttggaccacgttctgctctatgga
ccgcccggcctcggaaagacgacgttggcgaacgtcattgcgaatgaaatgggagtcaat
gtccgaatgacgagcgggcccgcaattgaacgtccgggcgatctggcggcggtcgtgtcg
tcgcttgaaccgggggatgtgctgttcatcgatgaaatccatcgattgaaccgttccatc
gaggaagtgctttatccggcgatggaggatttctgcctcgatatcatcgtcgggaaaggc
cctgccgcccgttcaatccggctcgatctgcctccgtttaccttgatcggtgcgacgact
cgtgcaggatccttgtcggcgcctctccgtgaccgcttcggcgtgccgttgcggctggag
tattatgatgtcgatccattgaaagaaatcgtcatacgcagcgctcatctgttcgaggtg
gagatcgatggacaggctgccatggaaattgcgcgccgttcccgtgggaccccgcggatt
gcgaaccggctattgcgccgcgtccgtgattatgcacaggtgcgcggaacgggagcggtg
acgctggagatgtcgaaagaagcgcttgaaatgctgcaggtcgactcgcatggtctcgac
catatcgaccataagctgctgaccgggatgattgaacggttccggggggggccggtcgga
atcgacacgattgctgcaagcatcggggaggaatcggtgacgatcgaggatgtgtatgaa
ccgtatttattgcagatcggtttcatccaacggactccgcgcgggcgggtggcgaccccg
ctggcgtacgaacatttcggctatccgatccatgatcaggatggaaattaa
DBGET
integrated database retrieval system
