Bacillus sp. OxB-1: OXB_3260
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Entry
OXB_3260 CDS
T03635
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
baco
Bacillus sp. OxB-1
Pathway
baco03030
DNA replication
baco03410
Base excision repair
baco03420
Nucleotide excision repair
baco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OXB_3260
03410 Base excision repair
OXB_3260
03420 Nucleotide excision repair
OXB_3260
03440 Homologous recombination
OXB_3260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baco03032
]
OXB_3260
03400 DNA repair and recombination proteins [BR:
baco03400
]
OXB_3260
Enzymes [BR:
baco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OXB_3260
DNA replication proteins [BR:
baco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OXB_3260
DNA repair and recombination proteins [BR:
baco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OXB_3260
NER (nucleotide excision repair)
GGR (global genome repair) factors
OXB_3260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAQ11729
UniProt:
A0A0A8JPQ1
LinkDB
All DBs
Position
complement(3261286..3263907)
Genome browser
AA seq
873 aa
AA seq
DB search
MTNKKIVLLDGNSLAYRAFFALPLLTNDTGIHTNAVYGFTMMLQNILADEKPTHMLVAWD
AGKTTFRHSTFSDYKGGRQKTPPELSEQFPYLRKLLEAYNIPQYELDNYEADDIIGTLSK
TDDPDTEVIVISGDKDLTQLANEKTTVFITRKGMTDIEKYTPEHVMEKYGIEPHQIIDMK
GLMGDASDNIPGVPGVGEKTALKLLKEYGSVEKVYESLDQITAKKLKENLTENEEQAFMS
KELATIETAAPITVGVQDLTYAGPDMEKVTALYQELQFKTLLEKMDQPEADQPATAIDVS
IVNEINADDLTDEMAIHLEMMEDNYLNAKLLGLALTDGEKIMYIPYDKAKESAILKAWLE
DPEKKKHTADSKATFAAFANHGVEIAGIDFDLLLATYIVNPSTSYTDVASIAREFHYTDI
QPDEAVYGKGAKKTKPAEQSIAEHAGRKAKAVWNLHQIVEQKLKDNDQFDLYHELELPLA
QILGKMESTGVKVDREILVSIGNELSAKLADLEKLIYEMAGETFNINSPKQLGVILFEKM
GLPPIKKTKTGYSTAADVLEKLESRHEIIGHILDYRQLGKLNSTYIEGLTKEIHEDGKIH
TRFQQALTQTGRLSSINPNLQNIPIRLEEGRKIRAAFVPSEPGWYMFAADYSQIELRVLA
HMSQDEKLIEAFRSDADIHTKTAMDVFGVAEDEVDSDMRRAAKAVNFGIVYGISDYGLSQ
SLNITRKEAGDFIDTYLASFPGVKRYMDTSVKEAKQQGYVTTLMNRRRYLPEITSSNFNL
RSFAERTAMNTPIQGSAADIIKKAMIDMDARLEAEGLKTRMLLQVHDELIFEAPEEEIEK
LKVIVPEVMESAIELDVPLKVDWAFGLSWYETK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacaagaaaatcgtgttgctggacgggaacagtctggcgtaccgggcatttttc
gcgttgcctttattgaccaatgatacggggatccacacaaatgcggtgtacggattcacg
atgatgctgcagaacatccttgctgacgagaaaccgacccatatgctcgtcgcctgggat
gccggcaaaacgacattccggcattcgactttcagcgattataaaggggggcgccaaaaa
acgccgccggagctttccgagcaattcccatatttgcggaaactgctggaggcatataat
attcctcagtatgaattggataattacgaagcggatgatattatcgggactttgagcaaa
acggatgatcccgatacggaagtgatcgtcatttcgggtgataaggacttgacccagctg
gcgaatgaaaagacgacagtattcatcacccgcaaagggatgaccgatattgagaaatac
acacccgaacatgtcatggagaaatacggcatcgagccgcatcaaatcatcgacatgaaa
gggctgatgggggatgcttccgacaacatccccggcgtgcccggagtgggcgagaaaacg
gcgctgaagctattgaaggaatatggctccgtcgaaaaagtctatgaatcgctcgatcag
attaccgctaagaaattgaaagagaacctaacggaaaatgaagagcaggcgttcatgagc
aaagagctcgctacgatcgagacagcagcgcccattacggtcggtgtgcaagatttgacg
tatgcaggtcccgacatggagaaagtgactgccctttatcaagaactccaatttaaaacg
ctccttgaaaaaatggaccagccggaagccgatcagccggcgacagctattgacgtatcg
attgtcaatgaaatcaatgcggatgatttaactgatgaaatggcgatccatctggaaatg
atggaagacaactatttgaacgcgaaactcctcggtttagctttgaccgatggagaaaag
atcatgtatatcccgtacgacaaggctaaggaatcggccattttgaaggcatggcttgaa
gatccggagaagaaaaaacataccgcagattccaaagccactttcgcggcgtttgcaaat
catggggtggaaatagcagggatcgattttgacctccttctcgctacgtacatcgttaac
ccatcgacatcgtatacggacgttgcttccattgcccgcgagttccattacacggacatc
caaccggacgaagcggtttacggaaaaggggcgaagaaaacaaagcctgcggagcaatcg
atcgccgaacatgcgggaaggaaagcgaaggcggtctggaatctccatcagatcgtcgaa
caaaagttgaaggacaatgatcagttcgatttgtaccatgaattggaactcccgcttgcc
cagattctcggaaaaatggaatcgacgggtgtcaaggtggatcgggaaatcctagtatca
atcggtaatgaactttccgcgaaactggctgatttggaaaaactgatctatgaaatggcg
ggggaaaccttcaatattaattcaccaaaacaattgggtgtcattttatttgaaaaaatg
gggctgccgcctatcaagaagacgaaaaccggttattccacagcggcggatgtcttggag
aagctggaaagccggcatgaaatcatcggacatatcctcgattatcgccaattgggtaaa
ttaaactcaacttatattgaaggcctgacgaaagaaatacatgaagacgggaaaattcat
acacgttttcaacaggcactcacgcaaacaggccgtctcagctccatcaatccgaatttg
cagaacatcccgatccggttggaagagggaaggaaaatccgggccgctttcgtgccttcc
gaaccgggctggtatatgttcgccgcagattattcccagatcgagcttcgggtgctcgcc
catatgtcacaggatgaaaagctgatcgaagctttccggtcggatgccgatatccatacg
aaaacggcgatggacgtattcggagttgcggaggatgaagtggattccgatatgcgccgg
gcagcgaaagcggtcaattttgggattgtgtatggcataagcgattatggactgtcgcaa
agcttgaatatcacgagaaaagaggcgggtgatttcatcgatacgtatttggcgagtttc
cctggagtgaaacgatacatggatactagtgtgaaagaagcgaagcaacaaggctatgtc
acgacattgatgaatcgccgccgctatttgccggaaatcacaagctccaatttcaattta
aggagcttcgctgaacggactgcgatgaacacaccgattcaaggaagtgcggcggatatt
atcaaaaaagcgatgatcgatatggatgctcgtttggaggcggaaggcttgaaaacccgc
atgctcctgcaagtgcatgatgagctcattttcgaagcacccgaagaagaaatcgagaaa
ttgaaagtgatcgtaccagaagtgatggaatcggcaatagaactagatgtacctctgaag
gtggattgggcgttcggtttatcctggtacgagacaaagtga
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