KEGG   Bacillus sp. OxB-1: OXB_3260
Entry
OXB_3260          CDS       T03635                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
baco  Bacillus sp. OxB-1
Pathway
baco03030  DNA replication
baco03410  Base excision repair
baco03420  Nucleotide excision repair
baco03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:baco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OXB_3260
   03410 Base excision repair
    OXB_3260
   03420 Nucleotide excision repair
    OXB_3260
   03440 Homologous recombination
    OXB_3260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:baco03032]
    OXB_3260
   03400 DNA repair and recombination proteins [BR:baco03400]
    OXB_3260
Enzymes [BR:baco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OXB_3260
DNA replication proteins [BR:baco03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     OXB_3260
DNA repair and recombination proteins [BR:baco03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     OXB_3260
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     OXB_3260
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: BAQ11729
UniProt: A0A0A8JPQ1
LinkDB
Position
complement(3261286..3263907)
AA seq 873 aa
MTNKKIVLLDGNSLAYRAFFALPLLTNDTGIHTNAVYGFTMMLQNILADEKPTHMLVAWD
AGKTTFRHSTFSDYKGGRQKTPPELSEQFPYLRKLLEAYNIPQYELDNYEADDIIGTLSK
TDDPDTEVIVISGDKDLTQLANEKTTVFITRKGMTDIEKYTPEHVMEKYGIEPHQIIDMK
GLMGDASDNIPGVPGVGEKTALKLLKEYGSVEKVYESLDQITAKKLKENLTENEEQAFMS
KELATIETAAPITVGVQDLTYAGPDMEKVTALYQELQFKTLLEKMDQPEADQPATAIDVS
IVNEINADDLTDEMAIHLEMMEDNYLNAKLLGLALTDGEKIMYIPYDKAKESAILKAWLE
DPEKKKHTADSKATFAAFANHGVEIAGIDFDLLLATYIVNPSTSYTDVASIAREFHYTDI
QPDEAVYGKGAKKTKPAEQSIAEHAGRKAKAVWNLHQIVEQKLKDNDQFDLYHELELPLA
QILGKMESTGVKVDREILVSIGNELSAKLADLEKLIYEMAGETFNINSPKQLGVILFEKM
GLPPIKKTKTGYSTAADVLEKLESRHEIIGHILDYRQLGKLNSTYIEGLTKEIHEDGKIH
TRFQQALTQTGRLSSINPNLQNIPIRLEEGRKIRAAFVPSEPGWYMFAADYSQIELRVLA
HMSQDEKLIEAFRSDADIHTKTAMDVFGVAEDEVDSDMRRAAKAVNFGIVYGISDYGLSQ
SLNITRKEAGDFIDTYLASFPGVKRYMDTSVKEAKQQGYVTTLMNRRRYLPEITSSNFNL
RSFAERTAMNTPIQGSAADIIKKAMIDMDARLEAEGLKTRMLLQVHDELIFEAPEEEIEK
LKVIVPEVMESAIELDVPLKVDWAFGLSWYETK
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgacgaacaagaaaatcgtgttgctggacgggaacagtctggcgtaccgggcatttttc
gcgttgcctttattgaccaatgatacggggatccacacaaatgcggtgtacggattcacg
atgatgctgcagaacatccttgctgacgagaaaccgacccatatgctcgtcgcctgggat
gccggcaaaacgacattccggcattcgactttcagcgattataaaggggggcgccaaaaa
acgccgccggagctttccgagcaattcccatatttgcggaaactgctggaggcatataat
attcctcagtatgaattggataattacgaagcggatgatattatcgggactttgagcaaa
acggatgatcccgatacggaagtgatcgtcatttcgggtgataaggacttgacccagctg
gcgaatgaaaagacgacagtattcatcacccgcaaagggatgaccgatattgagaaatac
acacccgaacatgtcatggagaaatacggcatcgagccgcatcaaatcatcgacatgaaa
gggctgatgggggatgcttccgacaacatccccggcgtgcccggagtgggcgagaaaacg
gcgctgaagctattgaaggaatatggctccgtcgaaaaagtctatgaatcgctcgatcag
attaccgctaagaaattgaaagagaacctaacggaaaatgaagagcaggcgttcatgagc
aaagagctcgctacgatcgagacagcagcgcccattacggtcggtgtgcaagatttgacg
tatgcaggtcccgacatggagaaagtgactgccctttatcaagaactccaatttaaaacg
ctccttgaaaaaatggaccagccggaagccgatcagccggcgacagctattgacgtatcg
attgtcaatgaaatcaatgcggatgatttaactgatgaaatggcgatccatctggaaatg
atggaagacaactatttgaacgcgaaactcctcggtttagctttgaccgatggagaaaag
atcatgtatatcccgtacgacaaggctaaggaatcggccattttgaaggcatggcttgaa
gatccggagaagaaaaaacataccgcagattccaaagccactttcgcggcgtttgcaaat
catggggtggaaatagcagggatcgattttgacctccttctcgctacgtacatcgttaac
ccatcgacatcgtatacggacgttgcttccattgcccgcgagttccattacacggacatc
caaccggacgaagcggtttacggaaaaggggcgaagaaaacaaagcctgcggagcaatcg
atcgccgaacatgcgggaaggaaagcgaaggcggtctggaatctccatcagatcgtcgaa
caaaagttgaaggacaatgatcagttcgatttgtaccatgaattggaactcccgcttgcc
cagattctcggaaaaatggaatcgacgggtgtcaaggtggatcgggaaatcctagtatca
atcggtaatgaactttccgcgaaactggctgatttggaaaaactgatctatgaaatggcg
ggggaaaccttcaatattaattcaccaaaacaattgggtgtcattttatttgaaaaaatg
gggctgccgcctatcaagaagacgaaaaccggttattccacagcggcggatgtcttggag
aagctggaaagccggcatgaaatcatcggacatatcctcgattatcgccaattgggtaaa
ttaaactcaacttatattgaaggcctgacgaaagaaatacatgaagacgggaaaattcat
acacgttttcaacaggcactcacgcaaacaggccgtctcagctccatcaatccgaatttg
cagaacatcccgatccggttggaagagggaaggaaaatccgggccgctttcgtgccttcc
gaaccgggctggtatatgttcgccgcagattattcccagatcgagcttcgggtgctcgcc
catatgtcacaggatgaaaagctgatcgaagctttccggtcggatgccgatatccatacg
aaaacggcgatggacgtattcggagttgcggaggatgaagtggattccgatatgcgccgg
gcagcgaaagcggtcaattttgggattgtgtatggcataagcgattatggactgtcgcaa
agcttgaatatcacgagaaaagaggcgggtgatttcatcgatacgtatttggcgagtttc
cctggagtgaaacgatacatggatactagtgtgaaagaagcgaagcaacaaggctatgtc
acgacattgatgaatcgccgccgctatttgccggaaatcacaagctccaatttcaattta
aggagcttcgctgaacggactgcgatgaacacaccgattcaaggaagtgcggcggatatt
atcaaaaaagcgatgatcgatatggatgctcgtttggaggcggaaggcttgaaaacccgc
atgctcctgcaagtgcatgatgagctcattttcgaagcacccgaagaagaaatcgagaaa
ttgaaagtgatcgtaccagaagtgatggaatcggcaatagaactagatgtacctctgaag
gtggattgggcgttcggtttatcctggtacgagacaaagtga

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