Bacillus sp. Pc3: SB24_03115
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Entry
SB24_03115 CDS
T03544
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
bacp
Bacillus sp. Pc3
Pathway
bacp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bacp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SB24_03115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacp03400
]
SB24_03115
DNA repair and recombination proteins [BR:
bacp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SB24_03115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6058
Phage_ssDNA_bind
Motif
Other DBs
NCBI-ProteinID:
AJC24226
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All DBs
Position
778440..779321
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AA seq
293 aa
AA seq
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MHTMWKGSISFGLVNIPVKLFAATEDKDIKFRSLHKEDHAPIKYEKICTGCEKSLEPDEI
VKGYEYVKGKYVIMTDEDLKDVKQEHEEKAVEIVDFVQLQEIDPIYFNRSYYVGPGDNGT
KAYTLLREALRTTGKIGIASITIRSKQQLAILRVYDNCIVMESIHYPDEVRNAGHVPGVP
EQTAVNEKELQTAITLINELTTEFDPEQYEDTYRKALLAKINDKLEHEEAGVTPAAAGPR
EDVIDLVSALQASIDRTKRPDREQAAPARTKDAASAGGGGKKQKTTRQKAGTS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatgtggaagggttcgatcagtttcggcctcgtcaatatcccggtcaagctc
tttgcggccactgaagataaagatataaaattccgcagtcttcataaagaagaccatgcg
ccgattaaatacgaaaaaatctgcaccggatgtgaaaaaagtctggagcctgatgaaatc
gtgaaaggctatgagtatgtaaaagggaaatacgtcattatgacagacgaagacttgaaa
gacgtaaaacaggaacatgaagaaaaagcggttgagattgttgactttgtccagctgcag
gaaattgatccgatttattttaaccggtcatattatgtcgggccgggagataacggcaca
aaagcctatacacttctgcgggaagcgctgaggacgacgggtaaaatcgggattgcctcc
attacgatccgctctaaacagcagcttgcgattcttcgcgtgtatgacaactgtatcgtg
atggaatccattcattatccggatgaagtcagaaatgccggacatgtgccgggcgttccc
gagcagacagccgttaatgaaaaagagctgcagacggcgattacgttaattaatgagctg
acaaccgagtttgacccggaacaatacgaagatacgtaccggaaagcccttctcgctaaa
attaacgataagctcgaacatgaggaagcgggcgtgacaccggctgctgccggcccgcgc
gaagatgtcatcgatcttgtcagcgcgcttcaggcaagcattgaccggacgaagcggccg
gatcgcgaacaggctgcgccggcgcggacaaaagacgccgcgtcagcaggcggcggaggc
aaaaagcagaaaacgaccagacaaaaagccggaacgtcttaa
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