Bacillus sp. Pc3: SB24_09075
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Entry
SB24_09075 CDS
T03544
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bacp
Bacillus sp. Pc3
Pathway
bacp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bacp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SB24_09075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacp03021
]
SB24_09075
03400 DNA repair and recombination proteins [BR:
bacp03400
]
SB24_09075
Enzymes [BR:
bacp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SB24_09075
Transcription machinery [BR:
bacp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SB24_09075
DNA repair and recombination proteins [BR:
bacp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SB24_09075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
MJECL34
Motif
Other DBs
NCBI-ProteinID:
AJC25310
LinkDB
All DBs
Position
complement(1928616..1932215)
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAINKLLQ
DIDLVKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTEEQRSKLLITTVGKLVFNEILPESFPYMNEPTKSNIEEKTPDRFFLDKGA
DVKAVIAEQPINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFRYSTKAGITVGV
SDIVVLDDKQEILEEAQSKVDNVLKQFRRGLITEEERYERVISIWSSAKDVIQGKLMKSL
DEVNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKPLKEGTEIIERLE
ERLIGRFARKQIKHPETGAVLINENELIDEDKALEIVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATISEIDGTIAEINEVRDKQQEIVVQGAVETRSYTAPYNSRLKVAEGDQITR
GQVLTEGSIDPKELLKVTDLTTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDIHQFTEANKKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMNYRKVKPVSNVQPSEDMVPAE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccggataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacattgaaa
cctgaaaaggacggcctgttctgcgaacgcattttcggaccgactaaggactgggaatgt
cattgcggcaagtacaagcgggttcgttataaaggcgtagtttgtgaccgttgcggagtt
gaagtaacgcgggctaaagtccgtcgtgagagaatggggcatattgaactggctgccccg
gtttctcacatttggtatttcaaaggtattccgagccgtatgggtcttgtattggatatg
tcaccgcgtgcgctggaagaagttatttactttgcttcttacgtcgtaactgacccggcc
aatacaccgctcgaaaagaaacagcttttatctgaaaaggaataccgtgcgtatctggat
aagtacggaaacaaattccaagcctctatgggtgcggaagccattaataaacttctgcag
gacatcgaccttgtcaaagaagttgatatgttaaaagaagagctgaagacttctcaagga
cagcgccgtacacgtgcgatcaaacgccttgaagtgcttgaagccttccgtaattcagga
aacaagccgtcttggatgatcctcgacgtgcttccggttattccgcctgaattaagaccg
atggttcagcttgacggcggacgtttcgcaacgtctgatctgaacgacctttaccgtcgt
gtcatcaaccgtaataaccgtttaaaacgtctgttagacctcggcgcgccaagcatcatc
gttcagaacgaaaaacgtatgcttcaggaagcagtcgatgctctgattgacaacggacgc
cgcggccgtccggttaccggaccgggtaaccgtccgcttaaatctctttctcacatgctg
aaagggaaacaagggcgtttccgtcagaaccttctcggtaaacgtgtagactactcaggc
cgttccgttatcgtcgtaggtccgcatctgaaaatgtatcagtgcggtttgccgaaggaa
atggcgcttgagctcttcaagcctttcgtcatgaaagagcttgttgaaaaaggccttgct
cacaatatcaagagcgcaaaacgcaaaatcgaacgcgtgcagcctgaagtatgggatgta
cttgaatctgtcattaaggagcatccggtcttactgaaccgtgcccctactcttcacaga
ttaggtatccaggctttcgaaccgacgcttgttgaaggacgcgccatccgtcttcacccg
ttagtatgtacagcttataacgctgactttgacggtgaccaaatggcggttcacgtacct
ttatcagctgaggctcaagctgaggcgcgcattctgatgcttgcggcccaaaacatcttg
aaccctaaagatggtaaaccggttgttacgccgtctcaggatatggtattaggaaactac
tacctgacgcttgagcgcgccggagcagtcggcgagggtatggttttcaaaaatacggac
gaagcgcttcttgcttatcaaaacggttatgttcaccttcatacgagagttgctgttgcg
gcgaactcccttaagaatgtgacatttactgaagaacagcgttcaaaattgttaattaca
actgtcggtaagctcgtcttcaatgaaattcttccggaatcattcccttacatgaatgaa
ccaacgaagagcaacattgaagagaagacacctgaccgtttcttcttagataaaggtgct
gacgtaaaagctgtgattgctgagcagccgatcaacgcaccgtttaaaaaaggcattctc
ggtaaaatcatcgcggaaatctttaaacgattccatatcacggaaacgtctaaaatgctt
gaccgcatgaaaaacctcggtttcagatattcaacgaaagccggcatcacagtaggggtt
tctgatatcgtcgttctcgatgacaaacaggaaatccttgaagaagcacaaagcaaagtt
gataatgtcctgaaacagttcagacgcggtttaatcaccgaagaagaacgttatgaaaga
gtcatttcaatttggagttcagcgaaagatgttatccaaggcaaactgatgaaatcatta
gacgaagtcaacccgatctacatgatgagtgactcaggagcccgtggtaacgcatctaac
tttacacagcttgcgggtatgcgcggtctgatggccaacccggctggacgaatcattgaa
ttgccgattaaatcaagtttccgtgaaggcctgacagttttggagtactttatctccact
cacggtgcgcgtaaaggtcttgccgataccgccctgaaaacagctgactcaggttacctt
acacgccgtcttgttgatgttgcgcaggatgttatcattcgtgaaacagattgcggaaca
gaccgcggtattcttgcaaaaccgctcaaagaaggcacggaaatcatcgagcgtctggaa
gagcgtctgatcggacgtttcgccagaaaacagatcaaacatcctgaaacgggtgctgtg
ctcattaacgaaaatgaattgatcgatgaagataaagcgctggaaatcgttgaagccgga
atcgaagaagtgtggatccgttctgcgttcacatgtaacactcctcatggtgtatgtaaa
cgatgctacggacgtaaccttgcaaccggaactgatgttgaagtcggcgaagcagtaggt
attatcgccgctcaatctatcggtgagcctggaacacagttaacaatgcgtacgttccac
acaggcggggttgccggagacgatatcacacaaggtcttccgcgtatccaagagcttttc
gaagcgcgtaatccgaaaggtcaagcgacgatttctgagattgacggtacaattgccgaa
atcaatgaagtccgcgacaaacagcaggagattgttgttcagggcgctgttgagacacgt
tcatacacggcaccttacaactcacgcctgaaagtggctgagggtgatcagattacccgc
ggccaagtgctgacagaaggttctatcgatccgaaagaacttcttaaagtcactgacctg
acaacggttcaggaatatcttctgcatgaggttcagaaggtttaccgtatgcagggggtt
gaaatcggcgataaacacgtagaagtaatggttcgccagatgcttcgcaaagtccgtgtg
atcgatgccggagatactgatgttctccctggcacattgctagatattcaccaattcaca
gaagcgaacaaaaaagtgctgcttgaaggcaatcgacctgctacaggccgtcctgtcctt
ctcggtatcacaaaagcttcactcgagacggattcattcttgtctgccgcatcattccaa
gaaacaacacgcgttcttacagatgctgcgattaaaggcaagcgcgatgaacttctcggc
ctgaaagagaatgttatcatcggtaagctggttccggccggtaccggtatgatgaattac
agaaaagtaaaacctgtttcaaacgttcagccttcggaagatatggttccggctgaataa
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integrated database retrieval system
