Bacillus sp. Pc3: SB24_13425
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Entry
SB24_13425 CDS
T03544
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bacp
Bacillus sp. Pc3
Pathway
bacp03420
Nucleotide excision repair
bacp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bacp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SB24_13425
03430 Mismatch repair
SB24_13425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacp03400
]
SB24_13425
Enzymes [BR:
bacp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SB24_13425
DNA repair and recombination proteins [BR:
bacp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SB24_13425
MMR (mismatch excision repair)
Other MMR factors
SB24_13425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
Viral_helicase1
AAA_30
PhoH
SLFN-g3_helicase
nSTAND3
AAA_16
DEAD
NACHT
Motif
Other DBs
NCBI-ProteinID:
AJC26109
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Position
2821237..2823555
Genome browser
AA seq
772 aa
AA seq
DB search
MAKRDKEWKEEQERINFVMKELEQKQTHLEASSGGLKQDIVGLRKTFWDDVTVNMDDAHE
AAETFSSIKQQAEMLSERERTHRLQYRQLQKIQKLKTSPYFGRVDFTEKGESSSERIYIG
LTSLMDENNEQFLIYDWRAPISSLYYQYSPGKARYEVPEETIEGDITLKRQFIIKNGTLK
AMFNTDMTIGDEMLQEVLSGHSGQHMKNIVSTIQKEQNEIIRDEKSKYLIVQGAAGSGKT
SAALQRAAYLLYRGRGVLDARQIVLFSPNILFNSYVSAVLPELGEENMEQATFQEYIIRR
LGRKFDCESPYEQLEYCLTEQNQDALSVRLAAIAYKASSAFESMIDRYAGSLSGSGLMCK
QISFRGDILISKERIEAYFYSLDQQLPIPNRAELTAEWLLAEISALEKKERKKEWVLQES
ELLDKEDYAEVYQTLKKQAADDDEPAFDDHQREQRLLGAIIVGKAFKPIKQAVRRLGFLD
IKRMYLRLFSDWGADEKPDHWESIGALTRNAFAERSLPYEDAAPYLYLQDLLEGKRKNTQ
MKHVFIDEAQDYSPFQLTYIQSIFPAAKMTVLGDVSQSIYAHTITGPSSLAGCFRNGAEK
YVSLKRTYRSTRQIVEFTKALLADGNDIEPFNRNGEKPRVLRTDTENARQEQLADTIQEL
RQKGWETVAVICKTAAEAKKVFQAVSAESGVRLINKENQPFQKGVCVIPVYLAKGIEFDA
VIAADASAAQYKSEHDRKLLYTACTRAMHHLTVLSPGEPSPFIKEVPAGLFV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtgataaagagtggaaagaagagcaggaaagaatcaattttgtcatgaag
gaactggaacagaaacaaactcatcttgaagcctcatcgggcggattgaagcaggatatt
gtcgggctgagaaaaacgttttgggatgatgtcaccgtgaatatggatgacgcccatgaa
gcggctgagacattttcaagcattaaacagcaggcagaaatgctttcagaacgtgaacgg
acgcatcggcttcaataccggcagcttcaaaaaatccaaaagctgaaaacctctccttac
ttcggccgtgtcgattttacggaaaaaggggagtcttcttccgagcggatttatatcggg
ctgacttctttgatggatgaaaacaacgagcaatttctcatttatgattggcgcgcgccc
atctcatctctttactatcaatattccccgggaaaagcccgctatgaagttcccgaagaa
acgatagagggagacatcacactgaagcggcagtttatcattaaaaacgggacgcttaaa
gcgatgtttaacacggatatgacgattggtgacgaaatgctgcaagaggtgctgagtggg
cattccggacagcatatgaaaaacatcgtgtcaaccatccaaaaagaacagaacgaaatc
atccgggatgaaaaaagcaaatatctcattgttcagggagccgccggaagcgggaaaaca
tccgcggcgcttcagcgggccgcttacttgctgtaccgcggtcgcggggtgcttgatgcc
cgtcagattgtattgttttccccgaacattttgttcaacagttatgtttccgccgtattg
ccggaattgggagaagagaatatggagcaggccacctttcaggaatatatcatccgccgg
ctcggacgaaagtttgattgtgaaagcccgtacgagcagcttgaatattgcctgactgaa
caaaatcaggacgcactttctgtaaggcttgcagccattgcttacaaagcgtcatcagct
ttcgagtccatgattgaccgctacgccggctcgctttccggctcgggtctgatgtgtaaa
cagatcagcttccggggagacatcctgatttcaaaagaacggattgaagcctatttttat
tcgcttgatcagcagctgccgattccgaacagagcggagctgacagcggaatggcttctc
gcggaaatcagcgctctcgaaaaaaaggagcgtaagaaggaatgggtcttgcaggagagc
gagctgcttgataaggaagactatgctgaggtttatcaaacactcaagaagcaggcggca
gatgatgatgaacctgcatttgacgaccatcagcgcgaacagcggctgcttggcgccatt
attgtcggcaaagcctttaaaccgattaagcaggccgtcagacggctcggctttctcgat
ataaaacggatgtatctccggctgttttcagactggggagctgatgaaaagcccgatcat
tgggagagcatcggcgctttgaccagaaacgcatttgcagaacggtcacttccgtatgaa
gatgccgctccgtatctgtatttgcaggatctgttagaaggaaaaagaaaaaacacacaa
atgaagcacgtcttcattgatgaagcgcaggattattctccatttcagctgacgtatatt
caaagcatcttcccagctgcaaagatgacggtgctcggtgatgtcagccagtcgatttat
gcccacaccattacgggcccttcttccctcgccggctgctttcgcaatggtgcagaaaag
tatgtcagcctgaagcggacttacagatcgacgcggcagattgttgaatttacgaaagcg
ctgctggctgacggtaatgacattgagccatttaaccggaacggggaaaaaccgcgtgtt
ttgcggacggatacagaaaatgcgcggcaggaacaattggcggatacaatccaggagctc
agacaaaaaggctgggagacggtcgccgtcatctgcaaaacggccgcggaagccaaaaaa
gtgtttcaggcggtcagcgccgagagcggtgtccgcttgatcaataaagaaaaccagcct
tttcaaaaaggggtatgcgtcattcccgtttatttggcaaaaggcattgagtttgacgcc
gtcattgctgctgacgcctctgctgcccagtacaaaagcgaacatgaccgtaagctgtta
tatacggcctgtacgcgcgcgatgcatcatctgaccgtattgtctccgggagaaccctct
ccttttattaaagaagtgcccgccggcttattcgtgtaa
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