Bacillus sp. Pc3: SB24_15525
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Entry
SB24_15525 CDS
T03544
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bacp
Bacillus sp. Pc3
Pathway
bacp03030
DNA replication
bacp03430
Mismatch repair
bacp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SB24_15525 (dnaE)
03430 Mismatch repair
SB24_15525 (dnaE)
03440 Homologous recombination
SB24_15525 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacp03032
]
SB24_15525 (dnaE)
03400 DNA repair and recombination proteins [BR:
bacp03400
]
SB24_15525 (dnaE)
Enzymes [BR:
bacp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SB24_15525 (dnaE)
DNA replication proteins [BR:
bacp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SB24_15525 (dnaE)
DNA repair and recombination proteins [BR:
bacp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SB24_15525 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
DNA_pol_IIIA_C
ASD1_dom
Motif
Other DBs
NCBI-ProteinID:
AJC26480
LinkDB
All DBs
Position
3220170..3223508
Genome browser
AA seq
1112 aa
AA seq
DB search
MSFVHLQVHSGYSLLNSAASVKELVTQAKELGYSSLALTDENVMYGAIEFYKACKSNGMK
PIIGLTASIYTDDTELEAHPLILLAETNTGYQNLVKISSALQSMAKGGMKRKWMKSYHEG
LIAITPGENGYIESLLQAGKFEEAVRAAEGFRELFGDGRFYLGYQPFKGHETLSEEILRL
SAETEIAVCAAGDVRYIKKEDQDAYRCLCAIKAGEKWEDQSGNLPDLYLRAPEEMAELYT
RHPEAIEAAARIARQCRVDVSLGQTQLPSFPAPDGKSADDYLAEICHEGLRLRFGTPDER
AVRRLEYELDVIRRMKFSDYFLIVWDFMKYAHEKGIVTGPGRGSAAGSLVAYSLFITDVD
PLKHSLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQNKYGAMHVAQIITFGTLAAKA
ALRDTGRVFGISPKEADQLARLIPSKPGMTLDEARRQSAQLNRRLSESAVLHKVFQIARK
IEGLPRHTSTHAAGVVLSKEPLSEVVPLQEGHDGVYLTQYAMDHLEDLGLLKMDFLGLRN
LTLIESIKTMIEKETNTKIDFSEISYQDEKTFSLLSNGDTTGIFQLESSGMRNVLKRLKP
SRLEDIVAVNALYRPGPMENIPLFIDRKHGRARVEVPHEDVRNILSDTYGVIVYQEQIMM
IASRMAGFSLGEADLLRRAVSKKQKDILDRERSHFVEGCLKKEYSVVTANEVYDLIVKFA
NYGFNRSHAVAYSMIGYQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLHEAKGSGIQVL
PPSINKSGFPFAPENGAVRYSLRAVKNVGVSAVKDIYKARTHKPFEDLFDFCFRVPAKSV
NRKAIEALIFSGAMDEFNQNRAALLASVDVALEHAELFRADDDQMGLFLEESFSIKPKYV
EAEEFPLVDKLRFEKEALGVYFSSHPLSAFRDLLKKRGAQAITAARQMPKGQLSIGALLA
GIKTIRTKTGQHMAFLTLSDETGEMEAVVFPDQYRRLSPLLKEGALLFAAGKMEERQEKT
QFIMSSASLLEQTEADRAPSVYIKIEGSRHNQEYLEKMKRILLEHKGETGVYLYYEKDKQ
TIRLPDTFHIQADHQVLYRLKELLGRENVVLK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttttgttcacctgcaagtacatagcggctacagtctgttaaacagcgccgcttct
gtaaaagagcttgttacacaagcgaaggaactcggatattcatcattggcgctgacggac
gaaaatgtgatgtacggcgccattgagttttataaagcatgcaaatcaaacggaatgaag
ccgattatcggtctgacggcttctatatacacggacgatacggagcttgaagcacacccg
ctcattcttttagcagagacaaacaccggatatcagaacctggtgaaaatctcaagtgcg
ctgcaatccatggcaaagggcggcatgaagcgaaaatggatgaagagctatcatgagggg
ctgatcgccattacgcccggtgaaaacgggtacattgaaagcctgcttcaagccgggaag
tttgaagaagcggtccgggctgccgaaggattccgggagctgttcggagacggccgtttt
tatttagggtaccagccgtttaaaggacatgagacgttatcagaagagattctccgcctg
tcagccgaaacggaaatcgctgtctgcgctgcgggagatgtccgttatatcaagaaagaa
gatcaagatgcgtaccgctgtctgtgcgctattaaagccggagagaagtgggaggatcag
agcgggaatctgccggacttatacttgagggcgcctgaagaaatggcagagctttacacg
cggcatccggaagcgattgaagcagccgcgcgtatcgcccggcaatgccgggtcgatgtc
agcctcggacagacacagcttccgtcttttccggcgccggacggcaaatcagccgatgac
tatttggcggagatctgtcatgaggggctgcgcctccgtttcggcactcctgatgagcgc
gctgtccgccggcttgaatatgagctggacgtcatcaggcgtatgaaattcagtgattat
tttctcatcgtatgggactttatgaagtacgcgcatgaaaagggcattgtgacaggcccg
ggaagggggtccgcggcaggctcgcttgtcgcttactcccttttcattaccgacgtggat
ccgcttaaacattctctgctgtttgagagatttcttaatcccgagcggatcagcatgccg
gatattgatatcgatttccctgatacgagaagggatgaggtcattcagtatgtacaaaat
aagtacggggccatgcacgtcgcccagattatcaccttcgggacattggccgcaaaggcg
gcgttaagggataccgggagagtgttcggaatcagcccgaaagaagccgaccagcttgcc
cgcctgattccgtcaaaaccgggaatgacgcttgatgaagcgaggcggcagtccgctcag
ctgaacaggcggctgtccgaatccgccgttcttcataaagtgtttcagatcgcaaggaaa
attgaaggtcttccgcggcacacgtcaacacacgcggccggggtcgttctcagtaaagag
ccgctttctgaagttgtccctcttcaagaagggcatgacggcgtgtatttaacgcagtat
gcgatggatcacttggaagatctcggtcttttaaaaatggactttttaggtttgcgcaac
cttacgcttattgaatccattaaaacgatgattgaaaaagagacgaatacgaaaattgat
ttttccgagatttcttatcaggatgaaaaaacgttctcactattgtcaaacggtgatacg
acgggtattttccagctggaatcatcaggaatgagaaacgtgctgaaacgcctgaagccg
tcaagactggaagacattgtcgcggttaacgcgctttacaggccgggaccgatggaaaat
attcctttatttatcgaccggaagcacgggcgggcgcgtgtggaagtgccgcacgaggac
gtacgaaatattctcagtgacacttacggcgtcatcgtctatcaagaacagataatgatg
atcgcctcgcgcatggcagggttttcattaggtgaagcggatctgctcagacgggctgtc
agcaaaaagcaaaaggacattctggacagagagcgaagccattttgttgaagggtgctta
aaaaaggagtattctgtagtcactgcaaacgaggtctacgatctgattgtaaaattcgct
aactacggattcaacagaagccatgctgtcgcatacagcatgatcggctatcagctcgcc
tatttaaaagcgcattatccgttatattttatgtgcgggctgttgacgagcgtcatcggc
aatgaggacaaaatatcgcaatatctgcatgaagcgaaggggagcgggattcaagtcctt
ccgccgtcaataaacaaaagcggttttccgtttgcgccggaaaacggagccgtcagatac
agtttgcgggccgttaaaaacgtaggcgtctcggcagtgaaagatatttataaagcaaga
acacataaaccgttcgaggatcttttcgatttttgctttcgcgtacctgcaaaaagcgtg
aatcggaaagctatcgaagcccttatattttctggcgccatggacgaattcaatcaaaat
cgcgccgccttgctggcctccgttgatgtggctttagagcacgctgaactgtttcgtgca
gacgatgaccaaatgggattgtttttggaagaatcgttctccattaagccaaaatatgta
gaggctgaggaatttccgctcgtggacaagcttcggttcgaaaaagaagctctcggtgtt
tatttctcaagccatcctttatccgctttcagggatctcctgaaaaaacggggggcgcaa
gcgatcacagcagcgcggcagatgccgaaggggcagctgtcaatcggcgctttgctcgcg
ggcatcaaaacgattcggacaaagacaggtcagcatatggcgtttctcacattaagcgat
gaaacgggagaaatggaagccgtcgtgtttcctgaccaatatagaaggctgtctccgctg
ttaaaggaaggcgcgctattattcgccgccggaaaaatggaagagcgtcaggagaagaca
caattcatcatgtcatccgcttctcttcttgagcagacggaggcagacagagcgccgtct
gtttacatcaaaatcgagggcagccggcacaatcaggagtatttggaaaagatgaagcgt
attttactggagcataaaggggaaaccggcgtttatctttattatgaaaaagacaagcag
acgatcaggctgccggatacttttcatattcaggcggaccatcaggtgttataccgttta
aaagagctgctgggccgcgaaaacgtcgtgttaaaatag
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