Bacillus sp. Pc3: SB24_17015
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Entry
SB24_17015 CDS
T03544
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bacp
Bacillus sp. Pc3
Brite
KEGG Orthology (KO) [BR:
bacp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacp03019
]
SB24_17015
03009 Ribosome biogenesis [BR:
bacp03009
]
SB24_17015
Enzymes [BR:
bacp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SB24_17015
Messenger RNA biogenesis [BR:
bacp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SB24_17015
Ribosome biogenesis [BR:
bacp03009
]
Prokaryotic type
rRNA helicases
SB24_17015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJC26759
LinkDB
All DBs
Position
3527710..3529026
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AA seq
438 aa
AA seq
DB search
MKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKNESVIGQSQTGTGKTHAYLL
PILNRIDPGSDTVQAVITAPTRELANQIHQEALKITQGAEDEPIRTKCFIGGTDKQKSID
KLKTQPHLVVGTPGRIADLIKAQALNVYKAQSLVIDEADLMLDMGFLEDVDYIGSRMPEE
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRDKDKLLFDMM
SHLNPYLGIVFANTKNTADHIAKYLTEKGMRIGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQALTIYELSDEDALVRL
EKMGIVFDYAELVNGEWKKGDDRHRRKKRKKSENEADQMAKRLVKKPKKVKPGYKKKMSY
EMEKIKRKQRRNKSNKGK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaactaaatttgatggatacaacttaaaaccgtttattatagatgcagttcac
cgccttggtttttatgaaccgacagatattcaaaagcgtctgatacctgctgtactgaaa
aacgaaagcgtgatcgggcagtcccagacggggacggggaaaacccacgcctatttattg
ccaattttgaatcggattgatccgggttctgatacggtacaggctgttattacggcgccg
acgagagagcttgccaatcagattcatcaggaagcgctcaaaatcacacagggtgcggaa
gatgagccgatccggacaaaatgcttcatcggcgggacggacaagcaaaaatcaattgat
aagctgaaaacacagcctcatctcgtcgtcggaacgccgggccggatcgcggatctgatt
aaggcgcaggcattgaacgtctataaagcgcagtctctcgtcattgacgaagctgatctg
atgcttgacatgggctttttagaagacgttgattacatcggatcccgtatgccggaagaa
cttcagatgcttgtgttctcagctacgattccggaaaagctgaagccgtttttgaaaaag
tatatggaaaatccgaagtacgcgcatgttgagccgaaaagaatcacagccgaaaagatt
gaacatgttttggttccttctaaacagcgtgataaagacaaactgctttttgatatgatg
tctcatctgaacccttatctgggcattgtgtttgcaaatacgaaaaacacggctgaccat
attgcgaaatacctgactgaaaagggcatgaggattggtcttctgcacgggggattaacg
ccgcgtgagcgtaagaaggtaatgaagcagattaatgatctggaattcacttatgtcatt
gcgacagaccttgcggcaagaggaattgacattaaaggcgtaagccacgtcatcaactat
gagcttccggacgatctggatttttatgttcaccgcgtcgggagaaccgcacgcgcgggt
tcatcaggccaagcactgaccatttatgagctttctgacgaagatgcgctcgtaagactc
gaaaagatgggtattgtgtttgactatgcggagcttgtaaacggcgaatggaagaaaggc
gatgaccgccaccgccgcaaaaaacgcaaaaaatcggagaatgaggctgaccaaatggcg
aagcgcctcgtaaaaaaaccgaaaaaagtgaagccgggctataaaaagaaaatgagctac
gaaatggaaaagataaaaagaaagcagagaagaaacaaatctaacaaaggaaagtag
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