Bacillus sp. Y1: DOE78_01910
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Entry
DOE78_01910 CDS
T05922
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03420
Nucleotide excision repair
bacq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DOE78_01910 (pcrA)
03430 Mismatch repair
DOE78_01910 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_01910 (pcrA)
Enzymes [BR:
bacq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DOE78_01910 (pcrA)
DNA repair and recombination proteins [BR:
bacq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DOE78_01910 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DOE78_01910 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AYA74306
LinkDB
All DBs
Position
362464..364686
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AA seq
740 aa
AA seq
DB search
MQYLTDKLLNGLNPEQQRAVKTTDGPLLLMAGAGSGKTRVLTHRIAYLMVEKQVNPYNIL
AITFTNKAAREMKERIYSMMGGVADEIWVSTFHSMCVRILRRDIDRLGYNRNFTILDTTD
QQSVVKTILKEKNLDPKKYDPRAILGAISSAKNELIGPEEFAKNAGGHMDQIVADVYEMY
QKRLRKNQALDFDDLIMTTIQLFQRVPEVLTFYQRKFQYIHVDEYQDTNRAQYMLVKLLA
QRFQNLCVVGDSDQSIYRWRGADIANILSFEKDYPRSEVILLEQNYRSTKRILFAANEVI
KNNLNRRDKNLWTENAEGNKIFYYRADSEQSEAQFVAGKIKEAIQSGKRKYSDFAILYRT
NAQSRVMEEVLLKSNIEYSIVGGVKFYDRKEIKDTLAYLRLIANPDDDISLSRVINVPKR
GVGSSSVDKIANFADMHDMSMFQALGSIELIGLSPKITKACREFYDLINNYTHMQEYLSV
TELVEEVLEKTGYYEMLKAEKSIEAQSRLENLDEFLSVTKNFEEGNEDKSLIAFLTDLAL
VADIDKLDEDGKQVDTVVLMTLHSAKGLEFPVVFLLGLEEGVFPHSRSLMEEAEMEEERR
LAYVGITRAEEELFITNAQMRTLFGRTNMNPPSRFIGEIPADLIDGLEPRKTPLQSQSAS
PFAARQAAAVRKPVLRPMTNSTGGEELGWKVGDKAVHGKWGTGTVVSVKGEGEGIELDIA
FPKPVGIKRLLAKFAPITKG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtgcaatacttaacagataaattattaaatggtttaaatcctgaacaacagagagcggtg
aaaacgacggatggtcctctgttattgatggctggtgcgggtagtggtaagacgagagta
ctaacgcatcgtattgcctatttgatggtagagaaacaagtgaatccgtacaatattttg
gcgatcacgtttacaaataaagcggcgcgtgaaatgaaagaacgtatttattccatgatg
ggtggagtggcagatgaaatctgggtatctacctttcactcgatgtgtgtacgcatatta
agaagagatattgaccgactaggatacaatcgtaattttacgattcttgacacaacggac
caacaatctgttgttaagacgattttaaaagaaaaaaaccttgatccgaaaaagtatgat
ccacgtgcaattcttggggccattagttcagccaaaaacgaactgattgggccagaagaa
ttcgcgaaaaatgcgggcggtcatatggatcaaattgttgctgatgtgtatgaaatgtat
cagaagcgattacgcaaaaatcaagcccttgattttgatgatttgatcatgactacgatt
cagctttttcagcgtgttccggaggtactaactttttatcaacggaagtttcaatatata
catgtggacgagtatcaagatacaaaccgtgctcagtatatgttggtcaaattgttggct
caacgcttccaaaatctatgtgtagttggtgactcggatcagtcgatttatcgctggcgt
ggggcagatattgccaatatcctttcttttgaaaaggattatccgcgttcagaggttatc
cttctggaacaaaactaccgctctacgaagagaattctttttgccgcgaatgaagtgatt
aaaaacaatctaaaccgtagagacaagaatctttggaccgaaaatgcagagggaaataaa
atcttctattatcgtgcggacagtgagcaaagtgaagcacagttcgtagcagggaaaatt
aaggaagctattcaaagcggaaaacgaaaatactccgactttgccattctgtacagaacg
aatgcccagtctcgtgtaatggaggaagtgttactaaagtcgaacattgaatactccatc
gtcggtggggtgaagttctatgacagaaaagaaatcaaagatacacttgcttacttacgc
ttgattgcaaaccctgatgatgatattagcttatcacgtgttatcaatgttccaaaaaga
ggggtcgggtctagctcagttgataaaattgccaactttgcggacatgcatgatatgtcc
atgttccaagcacttggatcgatagagttaattggcttaagtccgaaaatcacaaaggcg
tgtcgtgagttttacgatttgattaataactacacacatatgcaagagtatttatcagta
acagagcttgtagaagaagtgttagagaaaacaggctattatgagatgttaaaagcggaa
aaatcgattgaagcacaaagtcgactagaaaacttggacgaattcttgtccgttacgaaa
aactttgaagaaggaaatgaagataaaagtctaattgccttcttgacggatcttgccctt
gttgcggatatcgataagttggatgaagacggaaagcaagtcgataccgtcgtgttgatg
actttgcactccgcaaaaggtcttgaatttcctgtcgtgttcctattaggactagaggaa
ggagttttccctcatagtcgatctcttatggaagaagcggagatggaggaagagcgtcgc
ttggcatatgtgggaatcacaagagcggaggaagaactgtttatcacgaatgcgcaaatg
aggacattatttgggcgtacaaacatgaatccaccctctcgatttataggggagattcca
gccgatctgatcgatggtctagagccgaggaagacgccactacaatcacagtcagccagt
ccattcgccgctagacaagcagccgctgtacgcaaaccagtactccgtccaatgacgaat
tcaacgggtggagaagagcttggatggaaggtcggagacaaagccgttcacggaaaatgg
ggcacaggtacagttgttagcgtaaaaggcgaaggagaaggaattgaacttgatatcgca
ttccctaaaccagttgggattaaacgactgttagcgaagtttgctccgataacaaaaggg
taa
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