Bacillus sp. Y1: DOE78_03425
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Entry
DOE78_03425 CDS
T05922
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
bacq
Bacillus sp. Y1
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bacq03000
]
DOE78_03425
Transcription factors [BR:
bacq03000
]
Prokaryotic type
Helix-turn-helix
XRE family
DOE78_03425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_19
HTH_31
HTH_26
HTH_25
KorB
MerR_1
TetR_N
HTH_37
Cullin_binding
PIN_10
Phage_CI_repr
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AYA74582
LinkDB
All DBs
Position
complement(682692..683021)
Genome browser
AA seq
109 aa
AA seq
DB search
MIGDRVKKLRLEKKMSMSELAEQAGVAKSYLSSLERNLQTNPSIQFLEKISAVLHVPVDH
LIHEHPNKDELDSDWMKLVKEAMNSGVSKDQFKEFLEFNKWRSNQSNNN
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgattggagatcgtgttaagaaacttcgtcttgaaaagaaaatgtccatgtctgagcta
gctgaacaagctggtgtcgcgaaatcatacttaagttcattagaaagaaatttacaaacg
aatccgtctatccaatttcttgagaaaatttcagctgtccttcatgtaccagttgaccat
cttatacatgagcacccaaataaagacgaactagactctgactggatgaagcttgtgaaa
gaggctatgaactccggggtttcgaaggaccagtttaaagaatttcttgagtttaataaa
tggagaagtaatcaatcaaataataactaa
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